Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0088 ATGGCCGATATCGAAACCCTAGGTATTCTCGAAGAGATCGAAGCCCTAGTCTCCGATAAGCTTCAAGTGGTTTCCTACAAGTGGCTGAGTCGTAGTTTTTTGGTGACATCAAATGTGGCAAAAAGGTTGCTTCATGAGTTTGTTGAAAAACATGGAGGTGGGTTGGAAGTAGTTTATACTTTGTCTGGCTGGTTGAAGAATGATCCTCCAGTTTACCATATAAGGCTTGTTTCTGAACCTAAACTTGCAGAAGCAAAACAGGAATTTGATGGCCATTGCTCGGTTCAGGTTTATAGTGTGCAAGCTTGCATTCCAAAGGATCCAGCTGCACTTTGGAATGCTGAATTTGTGCAAGCAGAAGAGCTTTTTAAGCAGCCCTTCGCAGTTGATAATTGCTTGAGAGATAACAGGTTCTGTGGAATTTCCAATTCTTTTGTCAAGCGCATTGCTGAGGGAGCACCTGTCAGCAATGTGGCTTCACAGCCCAAAACTACAGGATTGCTGGGTCCATCCAAAAGCATTTCTGCACCTCAAACCATAGCTGTTCAACAGCCTCAGGAAAGAAAAGTACAGCAATCAAGCCCAAAAGTCAGTTTGCAGTCTCCCAGTGTGGTAACAGATGTCAAAGATGAAAGTAATGGCACCAGAGCTCATGATCAAGCTAGCAAGCCTCCTGCAGATAAAGGAAAAGCTCCTCCACTGCCTGCTAATAAAAAGAAAGGCCAGAATGATAAAAGTTCTGGAACTGAAGGCTCATTGGCAAATATGTGGGGGCGTGCATCTGTAAAGTCAAAGCCCAGTTGTGCCCCAGTGGATGTTGTTAGCGCAGAAGCTCAAATTTGTGCTCGTGAAGCTGTAGAAGGTGCGAGCAGTGATGAAGATGGTCAAGATGCCAATTTTAAGAGAGCCTCCAATGGTGATGGTGGTAGAAAGAGGAGAGTTGTTTTTGATTTCTCAGATGAAGAAGAGGAGTTTGAAGATGCAGTCAATTTGGCATCACCAGATCCTCCAAAAGGGAAATCATGTATAGTTTCAAAACAAAGTCCTAAACCTTTGGTTCCTGACAAAATCAATTTGAATTCTGACCAGCAAAAACAAGATAAACCAAAGGTCAAGGAAGAGAAATCATCTAATAGAGAATCTAACCTATCACCAAGGGAAGATTCTTCAGTTCTCAGCAAAGGCAAGAACAATGGGATTTCCTCTTCAGACAAGATTGCAGGTGGAGTTCCTGAAATTGATGTAAATAAGAAGGATAAAGTGACAGATGCTGCTCCAAATTCTCCTAAAAGAAGGAAAGTGATGAAAACACGGATAGATGAGCGTGGGAGAGAAGTAACCGAGGTAGTCTGGGAGGGTGAGGCAGAGACGAAGAAAGCTGACAGCAATGAGACAAAGAAATCTGAAAATAGTATAGTCACCAATGCGGCTAACAGGGCCCCTCCTGCTAAGAAATCGCCAGCAGTGGGAAACACCGCCCCTTCTAATGTAACTGGCAAAGCAGGAAGCAAGAAAGCAGGAAACTCGAAAGATCCTAAGCAGGGAAATATTATGTCATTCTTCAAGAGGGTTTGA 1575 0.4343 MADIETLGILEEIEALVSDKLQVVSYKWLSRSFLVTSNVAKRLLHEFVEKHGGGLEVVYTLSGWLKNDPPVYHIRLVSEPKLAEAKQEFDGHCSVQVYSVQACIPKDPAALWNAEFVQAEELFKQPFAVDNCLRDNRFCGISNSFVKRIAEGAPVSNVASQPKTTGLLGPSKSISAPQTIAVQQPQERKVQQSSPKVSLQSPSVVTDVKDESNGTRAHDQASKPPADKGKAPPLPANKKKGQNDKSSGTEGSLANMWGRASVKSKPSCAPVDVVSAEAQICAREAVEGASSDEDGQDANFKRASNGDGGRKRRVVFDFSDEEEEFEDAVNLASPDPPKGKSCIVSKQSPKPLVPDKINLNSDQQKQDKPKVKEEKSSNRESNLSPREDSSVLSKGKNNGISSSDKIAGGVPEIDVNKKDKVTDAAPNSPKRRKVMKTRIDERGREVTEVVWEGEAETKKADSNETKKSENSIVTNAANRAPPAKKSPAVGNTAPSNVTGKAGSKKAGNSKDPKQGNIMSFFKRV* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0088 524 MobiDBLite consensus disorder prediction 180 269 - -
Vvi19g0088 524 MobiDBLite consensus disorder prediction 180 210 - -
Vvi19g0088 524 Pfam DNA polymerase subunit Cdc27 23 523 IPR019038 GO:0005634|GO:0006260|GO:0043625
Vvi19g0088 524 MobiDBLite consensus disorder prediction 383 404 - -
Vvi19g0088 524 MobiDBLite consensus disorder prediction 287 319 - -
Vvi19g0088 524 MobiDBLite consensus disorder prediction 453 524 - -
Vvi19g0088 524 MobiDBLite consensus disorder prediction 285 439 - -
Vvi19g0088 524 MobiDBLite consensus disorder prediction 411 439 - -
Vvi19g0088 524 FunFam DNA polymerase delta subunit 7 149 - -
Vvi19g0088 524 PANTHER DNA POLYMERASE DELTA SUBUNIT 3 1 523 IPR019038 GO:0005634|GO:0006260|GO:0043625
Vvi19g0088 524 MobiDBLite consensus disorder prediction 361 382 - -
Vvi19g0088 524 MobiDBLite consensus disorder prediction 240 254 - -
Vvi19g0088 524 Gene3D DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 7 148 IPR041913 -
Vvi19g0088 524 MobiDBLite consensus disorder prediction 211 225 - -
Vvi19g0088 524 MobiDBLite consensus disorder prediction 489 515 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0088 K03504 - vvi:100250468 1016.53