Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0058 ATGAACAGTGATCTCACCCGCAACTATTTCAATGGATCAATACCTACAAGTTTCTCTCGGCTTCCTCTTGTTAACCGGTCCCTTTTGGGGAACCGTCTATCTGGATCAATTCCTAAGGAAATCGGTGATATTGCTACACTTGAGGAGCTGATCTTGGAAGATAATCAACTAGAAGGACCACTTAATGAAAACCTTGGAAATTTGGGCCGTTTGAGGAGACTCCTTCTCTCTGGAAACAATTTTACATGA 249 0.4217 MNSDLTRNYFNGSIPTSFSRLPLVNRSLLGNRLSGSIPKEIGDIATLEELILEDNQLEGPLNENLGNLGRLRRLLLSGNNFT* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0058 82 SUPERFAMILY L domain-like 5 81 - -
Vvi19g0058 82 Gene3D Ribonuclease Inhibitor 2 82 IPR032675 -
Vvi19g0058 82 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 4 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0058 Vvi-Chr19 662168 662759 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0058 4 81 Receptor kinase-like Gene Family AT1G53420 60.256 1.19e-23 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0058 - - vvi:100243601 115.546