Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0053 ATGGAATATGTGGATACAGCACTAACTAGCATTGGGCTATTGAAAGATTTGTGGTCATCTATTTCTAATTGCTTCAACTATCACGAAATCCTTGAAGAGAATTGCACAACCCTAAGAGACAAAATGGAAAGACTCAAGGGTCGTGAGCATGATATCAACACCATATTAAAAAATGCACAGTATGATCACCGAAAGAAGGAAAAGAAAGAAGTTGAAAATTGGTTGATTGAAGTGCAACATATGAAAGATCGTGCACAGAAGATAGAACAAGAAGCTGCAAAGAAAAGATGTTTCTCAAGATTAAGGTTCCTAAGCCAGTCTGAAGATAATATTAAACAAGTAGATGAGTTGATTGAGTTGGGTAAATTTCCTGATGGGATTTTAATTGATGTTCTTCAAGATGAAGGAATGACATTGTTAACAACACAGCTGATAGGTGAAACTACAACCAAAAGAATTTTGGAGAAGATTTGGACATGCTTAGAGAAAGGTGAGATCCAAAGCATTGGAGTTTGGGGAATGGGGGGGATCGGCAAAACAATTGTCGTTACCCATATTTACAATCGCCTCTTGGAAAATAGTAGCACTTTTGGCCAAGTATATTGGGTGACTATTTCAAAAGAATCAAGTATTCACGACTTGCAGGATGCTATTGCTGAAAAGTTCAATATAGAGTTTTCAGAAGAGGGAGATGACGATAAAAGGTCTGCATTATTATTCAAAGCATTTCAGAAACTAAAAAAATTTGTTCTTATATTAGATGATTTGTGGGAAGTTTATGAACCCACAGGTTGGAATTCCTCTTGGAGTTGA 813 0.3629 MEYVDTALTSIGLLKDLWSSISNCFNYHEILEENCTTLRDKMERLKGREHDINTILKNAQYDHRKKEKKEVENWLIEVQHMKDRAQKIEQEAAKKRCFSRLRFLSQSEDNIKQVDELIELGKFPDGILIDVLQDEGMTLLTTQLIGETTTKRILEKIWTCLEKGEIQSIGVWGMGGIGKTIVVTHIYNRLLENSSTFGQVYWVTISKESSIHDLQDAIAEKFNIEFSEEGDDDKRSALLFKAFQKLKKFVLILDDLWEVYEPTGWNSSWS* 271
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0053 270 Coils Coil 64 91 - -
Vvi19g0053 270 Gene3D - 131 268 IPR027417 -
Vvi19g0053 270 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 37 258 - -
Vvi19g0053 270 Pfam NB-ARC domain 153 259 IPR002182 GO:0043531
Vvi19g0053 270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 259 IPR027417 -
Vvi19g0053 270 Coils Coil 28 48 - -
Vvi19g0053 270 PRINTS Disease resistance protein signature 168 183 - -
Vvi19g0053 270 PRINTS Disease resistance protein signature 243 257 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi19g0053 Vvi-Chr19 605927 606739 Transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0053 - K13459 vvi:100258875 377.481