Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0051 ATGGCGGGAAAATACGTGGCATCATCGTCTCTACCAAACCCTAGAGGCGGAAGCACCAGATCTCCGATCCTCCTTCTCACCTTCTCTCTCCTCTCCCTTTCTCTCCTTCTCTTTCTCTTCTCCATCCTCCCCTCCCATCCAAACCCCAACCCTAACCGTAACCCTAACCTTAACACTCTTCTACCTGAATCCAGCTTCGTTGCTTCTCTCGAACACTTCCTCATTTCCAAGTCCCCCAGATCTCCTCCAATTCGAGATGATACTGTTGGTTCAGATGACCCGGAGGCAGTGAAGAAGCTCGATGATTTGGTGTGGCAGAGGGAGATTCGGAGGGTGTACGAGGACCCGTACTATCCGGCGGCGTCGGGGGTGACGTCGGCCATTAGGGTGTATGTGTACGAGATGCCGGCGAAGTTTACGTATGATCTCCTCTGGTTGTTTCGGAACACTTATAAGGAGACTTCGAATCGTACTTCCAATGGTAGCCCCGTGCATCGCCTGATTGAGCAGCATTCTATTGATTACTGGCTATGGGCGGATTTGACTGCACCAGAATCAGAAAGGCTTTTGAAAAATGTTGTCAGAGTGCATAGGCAGGAGGAGGCGGACCTATTCTACATTCCATTCTTCACAACCATCAGCTTCTTCTTGTTGGAGCCAGAGCAGTGGAAGCCACTTTACAGGGAAGCTTTGAAGTGGGTGACTGATCAACCTGCATGGAAACGGTCTGAAGGGAGGGACCACATACTTCCAGTTCATCATCCATGGTCTTTCAAGACTGTTCGGAAATCCATGAAGAATGCAATTTGGCTGTTACCAGACATGGACTCCACAGGGAACTGGTACAAGCCTGGACAAGTTTCACTTGAAAAAGATCTAATACTTCCTTATGTTCCAAATGTCGATTTGTGTGATGCCAAATGCTCATCGGAAAGTGAATCAAAGAGGAAGACACTTCTATTCTTCCGTGGGAGGCTTAAAAGGAATGCTGGGGGGAAGATTCGTGCTAAGCTTATGGCAGAACTAAGTGGTGATGATGGTGTGGTTATACAGGAGGGAACTGCTGGGGAAGGGGGGAAAGAAGCTGCCCAGAGAGGGATGCGCAAGTCTATTTTTTGCCTAAGTCCAGCTGGTGACACTCCATCCTCTGCTAGATTGTTTGACGCTATTGTTAGTGGGTGCATCCCTGTTATAGTTAGTGATGAACTGGAGCTTCCTTTTGAAGGAATACTTGATTACCGGAAGATAGCTCTATTTGTTTCCTCCAGTGATGCTATGCAGCCAGGTTGGCTTTTGACATTTCTGAAAAGTATCAGTCCTGCTCAAATTAAAGAAATGCAAAGGAACCTAGCCAAGTACTCGAGGCATTTTGTATATTCCAGTCCAGCTCAACTCTTGGGTCCAGAAGACTTGGTGTGGAGAATGATGGCGGGTAAGTTAATGAACATCAAGCTTCACACCAGAAGGTTGCAGCGTGTGGTGAGGGAATCCAGAAGGCTCTGCACGTGTGACTGCAAGCGTGCCAACTTCACAGGCCCCTAG 1542 0.4825 MAGKYVASSSLPNPRGGSTRSPILLLTFSLLSLSLLLFLFSILPSHPNPNPNRNPNLNTLLPESSFVASLEHFLISKSPRSPPIRDDTVGSDDPEAVKKLDDLVWQREIRRVYEDPYYPAASGVTSAIRVYVYEMPAKFTYDLLWLFRNTYKETSNRTSNGSPVHRLIEQHSIDYWLWADLTAPESERLLKNVVRVHRQEEADLFYIPFFTTISFFLLEPEQWKPLYREALKWVTDQPAWKRSEGRDHILPVHHPWSFKTVRKSMKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPYVPNVDLCDAKCSSESESKRKTLLFFRGRLKRNAGGKIRAKLMAELSGDDGVVIQEGTAGEGGKEAAQRGMRKSIFCLSPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDAMQPGWLLTFLKSISPAQIKEMQRNLAKYSRHFVYSSPAQLLGPEDLVWRMMAGKLMNIKLHTRRLQRVVRESRRLCTCDCKRANFTGP* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0051 513 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 39 457 IPR004263 GO:0006486|GO:0016757
Vvi19g0051 513 Pfam Exostosin family 126 433 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0051 Vvi-Chr19 572786 578895 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0051 - - vvi:100241759 989.178