Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0040 ATGGGATATGGTTTTGGTGGCTTCCTCTGCTTTTTTGCAGCAATTTTTTTGGTGTCATGGCTTCATGAATCCAATGCCAAAGTGGAGGGTTCTTCTAGTGATGAAGTAGCAGCACAGCTTGCTGGGTGTAATCTCTACCAAGGATCTTGGGTGATTGATGATACTTTTCCTTTGTATCAATCTTCAATTTGTCCGTTTATCGACAAAGAGTTCGACTGTCAAAAGAATGGGAGGCCGGACAAACTCTACCTCAAATACCGATGGCGGCCTAGCGGTTGCATTTTGCCGAGATTCAATGGAGTAGAGTTTTTGGCAAGGTATAAAGGGAAAAGGATAATGTTTGTGGGGGATTCTTTGAGTCTGAATCAATGGCAATCTCTCACTTGCATGTTGCATGCTGCAGTACCCAGGTCTAGGTACACTGTTGACAGACAGAATGACCTCTCCACTTTTACTATGCCAGAGTTTGGGATTTCAATATATTTGTCTCATAATGATTTTCTGGTTGATTTAGTTAAAGCAAAGGTAGGTAAGGTTTTAAGGCTTGATTCCATTGTTGGGGGCAATGCATGGAAAGGATTTGATATGCTTATCTTCAATACATGGCATTGGTGGATCCATAAAGGAAGCAAACAACCATGGGACTACATTGAAATAGGAGGTAAGTACTACAGTGACATGAATCGATTGGTTGCATTTAAGGAGGGACTAACCACATGGTCCAAGTGGGTCGAGTCCAACATCAATCCTGCTGTCACCAGGGTTTTCTTTCAAGGCATTTCACCTACTCATTATAATGGTGACGAATGGAAACAATCGGGGTCAACAACTTGCAATGGCCAAACTCAACCATTAAGTGGCTCCATGTATCCAGCAGGGATGCCATCGGAAGCAAAAATATTAAAGGAAGTGTTGAGTCAAATGTCGAAACCGGTTCAATTGCTCGATATAACGACATTATCACAGTTGAGGAAAGATGGACACCCATCCTACTATGGTAACAATGGAAGGAAGGAAGATGATTGTAGCCATTGGTGTCTTGCTGGAGTTCCTGATACTTGGAATGAACTTTTATATGCAAGTCTTATTATGGGTTAA 1098 0.418 MGYGFGGFLCFFAAIFLVSWLHESNAKVEGSSSDEVAAQLAGCNLYQGSWVIDDTFPLYQSSICPFIDKEFDCQKNGRPDKLYLKYRWRPSGCILPRFNGVEFLARYKGKRIMFVGDSLSLNQWQSLTCMLHAAVPRSRYTVDRQNDLSTFTMPEFGISIYLSHNDFLVDLVKAKVGKVLRLDSIVGGNAWKGFDMLIFNTWHWWIHKGSKQPWDYIEIGGKYYSDMNRLVAFKEGLTTWSKWVESNINPAVTRVFFQGISPTHYNGDEWKQSGSTTCNGQTQPLSGSMYPAGMPSEAKILKEVLSQMSKPVQLLDITTLSQLRKDGHPSYYGNNGRKEDDCSHWCLAGVPDTWNELLYASLIMG* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0040 365 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 95 360 IPR026057 GO:0016740
Vvi19g0040 365 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 19 358 IPR029962 GO:0016413
Vvi19g0040 365 Pfam PMR5 N terminal Domain 42 93 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0040 Vvi-Chr19 468979 472321 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0040 - - vvi:100253718 775.007