Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0037 ATGGCTTTGTGGGCTTGTTTCTTGGTTCAACTTGCTGGCCTTCTCTATTTACTCTCATGCGTGCCCTACGTAGTGTGTGGGGAGTTGCACATTAATCATGTGGACCATCACACACAAACGATGCAATCTGATGACTGTGATTGGTTCTTGGGGAGTTGGGTCCAAGATGATTCGTACCCACTTTATGATGCTTCAAATTGTCCATTCATCGGAACTGGTTTTGATTGCCTGAAAAATGGTAGGGCTGATAAAGAGTACTTGACGTATAGATGGAAACCAAATCAGTGTGATCTACCAAGGTTCAATGGTCAAGAATTTTTGGAGAGACTTAGAGGGAAAAGGATGTTGTTTGTAGGGGACTCTCTTGGCTTCAATCAATGGAAATCATTAACATGCATGCTTCACTCTGCAGCCCCCAGCACTAACTACACCTTCACAGAGACAAAGGGAGGAGGCACATTTTCCTTTCAGGAGTATGGAGTTTCAGTCATGATCAAGAAAAATGGATTTTTGGTGGACGTGGTGGTGGATGAAAAAATAGGGCGCATCCTGAAGCTGGATTCCATCAGTACCGGCAACCAGTGGCTAGGGTTCGACGTGCTCATCTTCAACTCCTATCACTGGTGGACTCACAAAGGCCGGTATCAAACATGGGATTACTTTCAGGTAGGTGACAAGCTGATCAAAGAGATGGATAGAGTCGAAGCTTACAAGATCGCCATGACGACGTGGGCGAAGTGGGTTGATGAAAATATCGATCCTTCAAAGACAAGGGTCTTCTTTCAGGGAGTTTCTGCAGTTCATGTCATTGGTGCGGATTGGGACGAGCCAGGGGCAAAGCAGTGCATAGGACAAACAACACCGGTGAATGGATCAGCGTATCCAGGCGGCAGCCTTCCAGCTGAAGATGTCCTGAGGAGCATAATCAGTAGAATGAAGAAACCAGCATTTTTAATGGACATTACATTGCTTACCCAACTAAGGAAAGATGGTCACCCATCTGTCTATGCTGGCCAAGGCAAGGCACTGGTTGACTGCAGCCACTGGTGTCTCGCCGGTGTACCTGATTCTTGGAACGAGCTCCTATATGCAGCTCTACTCGGGAAGTGA 1110 0.4667 MALWACFLVQLAGLLYLLSCVPYVVCGELHINHVDHHTQTMQSDDCDWFLGSWVQDDSYPLYDASNCPFIGTGFDCLKNGRADKEYLTYRWKPNQCDLPRFNGQEFLERLRGKRMLFVGDSLGFNQWKSLTCMLHSAAPSTNYTFTETKGGGTFSFQEYGVSVMIKKNGFLVDVVVDEKIGRILKLDSISTGNQWLGFDVLIFNSYHWWTHKGRYQTWDYFQVGDKLIKEMDRVEAYKIAMTTWAKWVDENIDPSKTRVFFQGVSAVHVIGADWDEPGAKQCIGQTTPVNGSAYPGGSLPAEDVLRSIISRMKKPAFLMDITLLTQLRKDGHPSVYAGQGKALVDCSHWCLAGVPDSWNELLYAALLGK* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0037 369 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 19 362 IPR029962 GO:0016413
Vvi19g0037 369 Pfam PMR5 N terminal Domain 45 97 IPR025846 -
Vvi19g0037 369 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 98 364 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0037 Vvi-Chr19 427587 430205 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0037 - - vvi:100264146 786.178