Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0024 ATGTCTCGTTCTCTGTTGTTGCCAGTCAATACAATTTGCAAGGATGCAGCTGGAGTCGCCGGGAACATCTTTGCTTTTGGGCTGTTTGTGTCACCAATACCTACGTTTAGGAGAATCGCCAGAAACCGATCAACAGAAAGTTTCTCAGGATTGCCATATATATATGCTCTCCTAAACTGCTTGGTAACTCTCTGGTACGGCACGCCCCTCGTATCTTATAATAATATAATGGTTACCACAGTCAATTCAATGGGAGCAGCCTTTCAGTTAGTCTACATAATCCTCTTCATAACATATACCGACAAAAGGAAAAAGGTGAGGATGTTTGGGCTGCTGATGGTAGATATTGTCTTATTCTTAGTCATAGTTGTTGGGAGCTTGGAAATAAGTGACTTTACCATTCGGCGGATGGTTGTTGGGTTCTTGAGTTGTGCTGCTCTCATATCTATGTTTGCTTCTCCATTGTTTGTAATTAATTTGGTGATCCAGACAAGAAGTGTCGAATTCATGCCATTCTATCTTTCTCTTTCAACTTTCCTAATGAGCGCTTCTTTTCTTGCTTATGGAATTTTGAACAATGATCCCTTTGTTTATGTCCCAAATGGAGCTGGAACCGTTTTGGGGATTGTGCAATTGGGGTTGTACTCCTACTATAAAAGAACATCTGCAGAAGAGTCTAGAGAACCTTTAATAGTGTCTTATGGGTAA 708 0.4068 MSRSLLLPVNTICKDAAGVAGNIFAFGLFVSPIPTFRRIARNRSTESFSGLPYIYALLNCLVTLWYGTPLVSYNNIMVTTVNSMGAAFQLVYIILFITYTDKRKKVRMFGLLMVDIVLFLVIVVGSLEISDFTIRRMVVGFLSCAALISMFASPLFVINLVIQTRSVEFMPFYLSLSTFLMSASFLAYGILNNDPFVYVPNGAGTVLGIVQLGLYSYYKRTSAEESREPLIVSYG* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0024 235 FunFam Bidirectional sugar transporter SWEET 135 228 - -
Vvi19g0024 235 PANTHER RAG1-ACTIVATING PROTEIN 1 23 223 IPR047664 -
Vvi19g0024 235 FunFam Bidirectional sugar transporter SWEET 15 105 - -
Vvi19g0024 235 Gene3D - 137 230 - -
Vvi19g0024 235 Gene3D - 12 106 - -
Vvi19g0024 235 Pfam Sugar efflux transporter for intercellular exchange 138 221 IPR004316 GO:0016020
Vvi19g0024 235 Pfam Sugar efflux transporter for intercellular exchange 18 103 IPR004316 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0024 Vvi-Chr19 278703 280610 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0024 11 234 Miscellaneous Gene Families AT3G14770 71.556 1.31e-114 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0024 K15382 - vvi:100255517 458.373