Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0022 ATGTCAAGAAGAGATCGCCGACCGCCATTTCCAATGAAAGATATTCCTCATGTACATGAACCCCCATTTGGCAGAGGCCTTGGGCCAAGGCCCCATCCCAAACTGCTAGAAGGAATGAGAGGAGCCCAGTTGCAAGAGTTACAGTTTGGGATGGGTCATAGACTGCCACCCCCTCACCCTTGGGTGATTGAGGAGCATCTAGCAGTTCAACAGCAAGAAATTCAAGGTCTGCTTGTTGATAACCAAGGGCTGGCGGCAACCCATGTTGCACTGAAGCAGGAGTTGGAAGCTGTTCAGCAAGAGTTGCAGCGAATGGTGCACTTTTCGGGTATGTTGCAGGCAGATAAGGATGTTGAGATGAGAACAATGCATGAGAGGTTGGCTAAGATCGAAGCAGATCTTTGTGGGATGGAGGTTATGAAGGCTGAGGTCCTTAAAGTTAATGCTGATGTTAAGGAGCTTACTTTGGCAAGGCAAGAGCTCACTGGAAAGGTCCAAGTAATGACCCAAGATTTGGCTAGAGCCAAGGCTGATTTGCAACATGCGTCAGCTTTAAAGGAAGAAATTGAGAGTGTGAAACATGAATTGCAGCGAGCAAGAGCTGCCATTGAGTATGAGAAGAAAGGATATGCAGAGAATTACCAGCATGGTCAGTTGATGGAGAATAACTTGATCTCAATGGCCAGGGAGTTGGAAAAACTTCGTGCAGAGCTTGCAAATGCTGATAAAGGAGCAAGTGCTGCTGCTTCTGGTGGGAATCCAGGTTATAGTGGAAATTATGGCAACCCTGAAGCTGGATATGCAGCAAATCCTTATCTTACAAACTATGGCATGAATCCGGTACCGGCAGGCGCAGAAAGTTTTCCTCAATATGGACCTGGACCTGGTTCCTGGGGTGCATACAATATGCAGCAAGCTCAAGGACACAGATAG 933 0.4737 MSRRDRRPPFPMKDIPHVHEPPFGRGLGPRPHPKLLEGMRGAQLQELQFGMGHRLPPPHPWVIEEHLAVQQQEIQGLLVDNQGLAATHVALKQELEAVQQELQRMVHFSGMLQADKDVEMRTMHERLAKIEADLCGMEVMKAEVLKVNADVKELTLARQELTGKVQVMTQDLARAKADLQHASALKEEIESVKHELQRARAAIEYEKKGYAENYQHGQLMENNLISMARELEKLRAELANADKGASAAASGGNPGYSGNYGNPEAGYAANPYLTNYGMNPVPAGAESFPQYGPGPGSWGAYNMQQAQGHR* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0022 310 Coils Coil 81 101 - -
Vvi19g0022 310 MobiDBLite consensus disorder prediction 1 29 - -
Vvi19g0022 310 Coils Coil 217 244 - -
Vvi19g0022 310 MobiDBLite consensus disorder prediction 1 20 - -
Vvi19g0022 310 Coils Coil 158 202 - -
Vvi19g0022 310 PANTHER PROTEIN FLX-LIKE 2 1 306 IPR040353 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0022 Vvi-Chr19 271545 274483 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0022 - - vvi:100262249 599.356