Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0014 ATGGCTTCTCGTAGTCTGGGAAATTTGAGCTTCCCAACACAACACGTTTCTTCGAAAACCCAATTTGTTTTTGGCTCCAAACCTCAGTTTGTGTCTTTCTCTGGAGCTCTAAGAAAACCCGTAAGGCAGAAATTCTCAACTCGTGTAATGGGTTCTTCTGCTTCTTCTTCTCAGAAACCAGACAGCATCCAAGAGCCGGGCAAAGTAGATTATACTTCTATTAGTGATGAAGAATGGAAGAAACGCCTCACAGGAGAACAATTCTACATTACTAGACAAAAGGGAACTGAGAGGGCTTTCACAGGGGAGTATTGGAACACCAAAACCCCTGGAGCTTACCATTGCATCTGTTGTGATACACCACTATTTGAATCATCTACTAAGTTTGACAGTGGAACTGGTTGGCCATCTTACTATCAGCCCATAGGAAACAATGTGAAGTCAAAGTTAGACTTGTCAATCATTTTCATGCCTCGTCAGGAAGTTCTTTGTGCAGCTTGTGATGCTCATCTTGGCCATGTCTTTGATGATGGCCCACCACCCACTGGGAAACGTTACTGTATCAATAGTGCTTCCCTGAAACTGAAACCAAAGTGA 597 0.4322 MASRSLGNLSFPTQHVSSKTQFVFGSKPQFVSFSGALRKPVRQKFSTRVMGSSASSSQKPDSIQEPGKVDYTSISDEEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTPGAYHCICCDTPLFESSTKFDSGTGWPSYYQPIGNNVKSKLDLSIIFMPRQEVLCAACDAHLGHVFDDGPPPTGKRYCINSASLKLKPK* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0014 198 ProSiteProfiles Methionine-R-sulfoxide reductase (MsrB) domain profile. 76 198 IPR002579 GO:0033743
Vvi19g0014 198 MobiDBLite consensus disorder prediction 47 63 - -
Vvi19g0014 198 PANTHER METHIONINE SULFOXIDE REDUCTASE 45 198 IPR028427 GO:0006979|GO:0016671|GO:0030091
Vvi19g0014 198 Pfam SelR domain 78 197 IPR002579 GO:0033743
Vvi19g0014 198 FunFam Peptide methionine sulfoxide reductase MsrB 68 198 - -
Vvi19g0014 198 Gene3D Peptide methionine sulfoxide reductase. 67 198 - -
Vvi19g0014 198 SUPERFAMILY Mss4-like 74 197 IPR011057 -
Vvi19g0014 198 NCBIfam peptide-methionine (R)-S-oxide reductase MsrB 75 197 IPR002579 GO:0033743
Vvi19g0014 198 MobiDBLite consensus disorder prediction 47 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0014 Vvi-Chr19 153742 156440 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0014 K07305 - vvi:100267520 414.846