Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0012 ATGAATGAAGATCAAGCTCCGCAATACAGATTGCTAGTTAAAGAAGTTGAAGAGCCTGAGCTAGTGAAGGGAACAACAATTCTTGATCAACCACCATCTCTTAGACTCAGACCTTGGCAATGGTGGATCTTGGTCACCCTCAACATCACCTTCCTTCTCATCGGACAATGTGGTGCTGTCATCCTAGGTAGATTCTATTATGACCAAGGTGGAACAAGTAAATGGATGGCAACACTAGTCCAAACCGCAGCATTCCCCATCTTCTATATCCCATTCTTCTTCTTTCCTTCCCCCAAAAATCTTCCTGTTACCACAACCGCTGCAGCCATCCTTGACAGGCCTTCTATTCCTATGCTCTCCTTGATTTACTTCTTCCTTGGTGCTCTCCTAGCTGGTGACAACATGTTGTATTCGATTGGCCTTCTGTACCTTCCTGTATCTACTTACTCTCTCATATGCACAACTCAGTTGGCCTTCAATGCAATTTTTTCTTTCTTCATCAATTCTCAGAAGCTCACCCCTTGGATAATCAATTCTCTAGTCCTCCTGACTTTATCAGCTTCCCTTGTCGCAGTAAATTCCGATCCCACTGAGCATAAAGGGGTGTCAAAAGGAAAGTATGCGCTTGGTTTCATCTGCACTCTAGGTGCATCAACATGTTACTCGCTATTGCTTTCTCTAATGCAGTTATCCTTTGAAAAAGTTTTGAAGAGGGAAACGTTGTCAGTGGTACTGGAAATGCAGATCTATACATCCCTTGTTGCTACATTTATTTCCATAGGAGGCTTATTTGCCAGTGGGGAATGGAGGGACTTGAGGGATGAAATGGAGAGTTTCAAGGAGGGGAGAGTTCTTTATTTTATGGCTTTGGTTGGGGCATCTTTGGCTTGGCAGGTTTCATCTATTGGAGTAGTGGGGCTAATTTTTGTGGTGTCCTCCCTTTTCGCCAATGTTATTAGTACATTGGCGTTGCCTCTTGTTCCAGTTGCTGCAGTGCTCTTTTACCGTGAGACAATGAATGGGGCAAAGGTGGTGGCTATGTTATTGGCAATTTGGGGATTCGCCTGGTATCTGTACCAACATTATCTTGATGGGAATGAACCAAGGGTGAAAGAGATGAGTTCTAATGAAGTCTTCGATGAGTCTAGTTCTTGA 1155 0.4372 MNEDQAPQYRLLVKEVEEPELVKGTTILDQPPSLRLRPWQWWILVTLNITFLLIGQCGAVILGRFYYDQGGTSKWMATLVQTAAFPIFYIPFFFFPSPKNLPVTTTAAAILDRPSIPMLSLIYFFLGALLAGDNMLYSIGLLYLPVSTYSLICTTQLAFNAIFSFFINSQKLTPWIINSLVLLTLSASLVAVNSDPTEHKGVSKGKYALGFICTLGASTCYSLLLSLMQLSFEKVLKRETLSVVLEMQIYTSLVATFISIGGLFASGEWRDLRDEMESFKEGRVLYFMALVGASLAWQVSSIGVVGLIFVVSSLFANVISTLALPLVPVAAVLFYRETMNGAKVVAMLLAIWGFAWYLYQHYLDGNEPRVKEMSSNEVFDESSS* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0012 384 PANTHER OS09G0467300 PROTEIN-RELATED 36 366 IPR030182 GO:0015211|GO:0016020
Vvi19g0012 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 107 194 - -
Vvi19g0012 384 Pfam Purine nucleobase transmembrane transport 43 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0012 Vvi-Chr19 147249 149194 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0012 1 372 Organic Solute Cotransporters AT4G08700 48.930 1.34e-114 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0012 - - vvi:100262357 728.013