Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0007 ATGGCTAAAGCAGCTGCTCTCTCTCTCTTTCTCCTGCTTTTGTCCTTCATTTCAGGAGGAACTTTGAAAATGGTGAATGGAGAGAAAACTTGGTGTGTGGCCAAGCCATCATCCGATCAGGCTACTCTTTTAGCCAACATCAATTATGCATGTTCACAAGTAGATTGCCAGGTTCTGCAGAGGGGCTGCCCTTGCTTCTCCCCAGATAATCTCATGAACCATGCCTCAATAGCCATGAATCTTTACTACCAGTCAAGGGGAAGGAACCACTGGAACTGCTATTTTCAGAACTCTGCCGTCATTGTCATGACCGATCCAAGTTATGGCAGCTGCACCTATGCGTAA 345 0.4638 MAKAAALSLFLLLLSFISGGTLKMVNGEKTWCVAKPSSDQATLLANINYACSQVDCQVLQRGCPCFSPDNLMNHASIAMNLYYQSRGRNHWNCYFQNSAVIVMTDPSYGSCTYA* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0007 114 PANTHER BETA-1,3 GLUCANASE 17 113 IPR044788 -
Vvi19g0007 114 Pfam X8 domain 30 99 IPR012946 -
Vvi19g0007 114 Gene3D - 23 113 - -
Vvi19g0007 114 SMART X8_cls 30 113 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0007 Vvi-Chr19 76044 77802 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0007 17 113 Glycoside Hydrolase AT2G05790 43.434 1.18e-23 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0007 - - vvi:100257244 222.246