Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0004 ATGGTGGATGTTGCTAAAGAAGTTGGAGCTGGTGCTGTCTGCCTTGGGTGTACCGGGAAAGGAAATGATCAGGTTCGGTTTGAGCTCACTTTCTTGGCTCTGAACCCCAAGCTAAATATTGTGGCTCCATGGAGGGAATGGGATATTGCAGGGAGTGAAGAGGCCATTGAGTATGCTAGAAAGCATAGTGTTCCCGTTCCAGTGACAAAGAATTCCATATTTTGCAGGGATAGGAACGTATGGCATATTAGTCATGAGGTAAGCGTTGTGGTTGTCCTCAATCTAGCTCTAGTTATAGTGATGGGGGGGGGGGGGGTGTTCACGTGGTGTGGAGGTCTCAATAATCGGTCAAAGTCAAGAATTGATCGTTTCCTTATTTCTGAGGATTGA 390 0.4667 MVDVAKEVGAGAVCLGCTGKGNDQVRFELTFLALNPKLNIVAPWREWDIAGSEEAIEYARKHSVPVPVTKNSIFCRDRNVWHISHEVSVVVVLNLALVIVMGGGGVFTWCGGLNNRSKSRIDRFLISED* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0004 129 ProSitePatterns Argininosuccinate synthase signature 2. 16 27 IPR018223 GO:0004055|GO:0005524|GO:0006526
Vvi19g0004 129 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 2 87 - -
Vvi19g0004 129 Pfam Arginosuccinate synthase 1 89 IPR001518 GO:0004055|GO:0005524|GO:0006526
Vvi19g0004 129 PANTHER ARGININOSUCCINATE SYNTHASE 1 89 IPR001518 GO:0004055|GO:0005524|GO:0006526
Vvi19g0004 129 Gene3D HUPs 1 72 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0004 Vvi-Chr19 38675 39146 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0004 K01940 - gmx:100795886 142.124