Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0003 ATGGCGAAGACCTCTATGACCCTCACCGTCAAGGAGGGGCAACCGCCTCCACCATTATGTGCGGCAGCAGTGTCAGGGGAAAGTGGTGGGGGCGATCCTATGAGATCCGTGAATGAACTTCGCAACCTCTCTACTGTTCTACACGCATTTAGACGAAGATGGGACGAGTTGCAGAAGCATCTGGATTTCATTCAAGATGCCATTGCCAGCAGGTCCAGAGAGTTGGATGCTTCCCCGCAACATCACCAAGCCCTAGCTTCCAATACCTTGGAAACATCTAGTCCGGAATCAGCTGATCTACATTCAGAACCAATGCCAGCGCAGACATCCGTGTCGGAGCTTGGATTTCTCTGCGGAATGATGCGTAGCCGAGGCCTCCGCAAGTACATCATCTCACATCTCTCGGACGTTGCCAAGCTCCGTGAAGAAGTCCCTGCAGCTTTAAAGGGCGCTCCAAAACCTGCCAAACTTGTACTTGAATGCATTGGGCGCTTTTTCCTCCAGGGAAGCAAGGCATTCGGCAAAGCCACCCACATGGTTCCTTCTCGACAAGCATCACTTCTAATTTTGGAATTTTTTCTACTCTCTGACTGCACCGAGATGGAGCCATCCGTGAAGGAAGAAGCTGATTTAGCTGCAGTTACTTGGAGGAAGAGGCTTATCAATGAAGGTGGAGTTTCCAATGCCAGTGACATTGACGCTCGGGGTTTGCTTCTTCTGGTTGCTAGTTTCGGCATCCCGGCTTTATTTAGGAATGAAGATCTCAGGAATTTGATCCGGCTTAGTTGTCCAAAGGAGATTTCTGATGCCTTGCGACGCTCCCGTTTTCTCCTCGCCAGGGTCCCAGATGTAATTCAGGGGATGATAAAGAATCAAATGAATGTTGAAGCTGTTGACTTTGCTTATACTTTTGGGCTTGAAGAGAAGTTTCCTATTTGGAAAATTTTGACATCGTTCTTGCGAGAGCATAAAGAGGAATGGAAAAGAACAAGAGAAGAGGATTCACCTATTAGACTGAAAAAAGCAAATGAAAACTATTTGTCAGCTATGAAATCTGTGACCAGGTGTTTGGAAGATCACAGGGTAGATCCTTCCAAGCTTCTTTCTGGATGGCATATTGATGAAAAGATAATCCAGTTGGAGAAAGAGATGGCTGATCTTGATAAGAAAATGGAAGGCAAGGTGATGCTGAAGAGAAAAGCAGATGAAATTGACTCATTAAAGAAGATGAAAACTCGAGAGATAAAACATTCACCGATTGCTGCACCATCCTCAGTGATTGGGTTGCAAGAGCAGAGGGTTGCTGATAACATGGCTAGCAGGAGCTTTTATGATAGTACAATGCCAATAAACTTCTTAGACAGTGGATTCCCTGGTCATATAAGTACTTATCCTGCTGCTTCAGCCATGCTGCATGGATCTGGTGGTGGGTCCTTGCCTGAAAATATTACTGGCACGATGTCAGGAAGTGGAAGTGGAACCAGGGTGCATGGAACTGGTACTGGACCTGGTATGGCTGGAACTGGTGGTGTTCCGTCGATGGCTTCATTTTCTGGGGCCCATGGGGAGATGCTATTTGATAGGACAGGGCAAATGATGAAGAACAATGGTCCGCCATATGCAGGGCGCAGGGACATGGGCTTCAATGACAGAGTAATTGGACAAAGTTTTATTGCACATCCTGCATCCATGGGAGTCGATAGCATTTTTGGGCCATCAACATCCATGGAAAGCTTCCCAGGGATGCCAAACGCTCCATCTATTAATGCGGCTAATGGAAGCTCAGCCTCTGATCTCTATCAGTTTGCTGATGCTGTTTTTGGAAGGTGA 1830 0.4689 MAKTSMTLTVKEGQPPPPLCAAAVSGESGGGDPMRSVNELRNLSTVLHAFRRRWDELQKHLDFIQDAIASRSRELDASPQHHQALASNTLETSSPESADLHSEPMPAQTSVSELGFLCGMMRSRGLRKYIISHLSDVAKLREEVPAALKGAPKPAKLVLECIGRFFLQGSKAFGKATHMVPSRQASLLILEFFLLSDCTEMEPSVKEEADLAAVTWRKRLINEGGVSNASDIDARGLLLLVASFGIPALFRNEDLRNLIRLSCPKEISDALRRSRFLLARVPDVIQGMIKNQMNVEAVDFAYTFGLEEKFPIWKILTSFLREHKEEWKRTREEDSPIRLKKANENYLSAMKSVTRCLEDHRVDPSKLLSGWHIDEKIIQLEKEMADLDKKMEGKVMLKRKADEIDSLKKMKTREIKHSPIAAPSSVIGLQEQRVADNMASRSFYDSTMPINFLDSGFPGHISTYPAASAMLHGSGGGSLPENITGTMSGSGSGTRVHGTGTGPGMAGTGGVPSMASFSGAHGEMLFDRTGQMMKNNGPPYAGRRDMGFNDRVIGQSFIAHPASMGVDSIFGPSTSMESFPGMPNAPSINAANGSSASDLYQFADAVFGR* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0003 609 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 38 394 - -
Vvi19g0003 609 MobiDBLite consensus disorder prediction 81 104 - -
Vvi19g0003 609 Pfam Frigida-like protein 110 391 IPR012474 -
Vvi19g0003 609 MobiDBLite consensus disorder prediction 74 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0003 Vvi-Chr19 33097 45410 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0003 - - vvi:100258973 1185.63