Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2116 ATGCTTGTCCAAATTGGCCATGCATGTAGGGACGAAGAGAAAGGTGGAAAAAAGGAAAACCTGCATCAATTCTTTAACATGGTAGCTGTAGGCCTGGCTGGTGAAACCCCTCATATGATCAGTGCTGCAGTGAAAGGCCTAGCTCGTTTGACTTACGAGTTTTCTGACCTTGTTTCAACTGCTTACAATGTGCTTCCATCCACATTTCTTCTCCTAAAGAGAAAGAACCGAGAGATTGCTAAAGCTAATTTAGGTTTGTTGAAGGTGTTGGTGGCCAAATCACAAACTGAGGGGTTGCAGATGCACTTAAGGAGCATGGTAGAGGGCCTGCTGAACTGGCAAGATATCACCAAAAACCAGTTCAAAGCTAAGGTTTGTGATTTTGCCCTCTGCTTCTCTTAA 402 0.4403 MLVQIGHACRDEEKGGKKENLHQFFNMVAVGLAGETPHMISAAVKGLARLTYEFSDLVSTAYNVLPSTFLLLKRKNREIAKANLGLLKVLVAKSQTEGLQMHLRSMVEGLLNWQDITKNQFKAKVCDFALCFS* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2116 133 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 125 - -
Vvi18g2116 133 SUPERFAMILY ARM repeat 22 122 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2116 Vvi-Chr18 29341793 29342811 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2116 K14794 - vvi:104877465 265.774