Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2114 ATGAGTCCTACTAGCAAGCATTACATGGTTCTTCTGTTGATCACCTATTTTTCGCTCTTTGTGGGCAGTGTGTCTTCAACCCTGCTTTCAAAGTTCTATTTCATCCATAAGGGTTCGAGCATATGGGTGTCAACATGGGTTCAATCTGTTGGATTTCCTCTCCTCCTCCTCCTCATTTACCTGCCCCACCATCTCTTCAAATGCACACGGAGGCGACCCTTCACAAGTTTCACTCCGAAGCTCCTCCTCTTATCAGTTTTCATAGGACTCATGTTAGGCCTGAACAACTTTCTCTTCTCCTGGGGAACCTCCTACCTACCTGTATCAACTGCATCTCTCCTTCTATCATCCCAACTGGCCTTCAATCTCATACTCTCTATCATCATCGTGAAGCAAAAGATCACATTTTCTAACTTCAACTGCGTGATTCTTCTCACCCTCAGCTCCATCCTCCTGGCCTTGAGTTCCAACCATGACAGACCAAAAGACTTGACCCATGCCAAGTACTTCATAGGCTTCTTCTCCACCATAGGAGCAGGCCTGCTCTTTGCTCTCTATCTCCCAGTGATGGAGATGATCTACAAGAAAGTTTACTGCTACGAGATGGTGATTGAAATGCAGCTGGTGATGGAGATGGCAGCAACGGCCTTGGCCACCATTGGAATGGCAGCCGGCCATGGGTTTTCAGAGATGAAGAAGGAGAGTGAAATGGTGTTTGATCTGGGTCCAAAGGCATACTGGTTGACACTGGTATTCAACATGGTGACTTGGCAGTTTGCCTTCATGGGAACCGCAGGGCTGGTGTTCTTGACAACTTCTCTGACCGGAGGAATCTGCATGACTGCCTTGATGGCCGCGAACGTGCTGGGAGGTGTCTTGGCGTATGGAGATAAGCTTGGAGGAGGGAAGGTGGTCTCCACCTTGCTCTGCGTCTGGGGCTTTTGCTCCTATGTCTATGGCATGTATGTTAAGATGAAAGAAGAAGAGAAAAACAACAATCAATCAATACAACTGCCTGAGCAGCAAATGGTTTGA 1035 0.4763 MSPTSKHYMVLLLITYFSLFVGSVSSTLLSKFYFIHKGSSIWVSTWVQSVGFPLLLLLIYLPHHLFKCTRRRPFTSFTPKLLLLSVFIGLMLGLNNFLFSWGTSYLPVSTASLLLSSQLAFNLILSIIIVKQKITFSNFNCVILLTLSSILLALSSNHDRPKDLTHAKYFIGFFSTIGAGLLFALYLPVMEMIYKKVYCYEMVIEMQLVMEMAATALATIGMAAGHGFSEMKKESEMVFDLGPKAYWLTLVFNMVTWQFAFMGTAGLVFLTTSLTGGICMTALMAANVLGGVLAYGDKLGGGKVVSTLLCVWGFCSYVYGMYVKMKEEEKNNNQSIQLPEQQMV* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2114 344 Pfam Purine nucleobase transmembrane transport 11 326 - -
Vvi18g2114 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 64 158 - -
Vvi18g2114 344 PANTHER OS09G0467300 PROTEIN-RELATED 7 333 IPR030182 GO:0015211|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2114 Vvi-Chr18 29309236 29310270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g2114 1 320 Organic Solute Cotransporters AT1G30840 66.355 2.91e-145 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2114 - - vvi:100248269 664.455