Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2102 ATGACGATCACATCAAAGAGCCCTTTGGTCGTGGCCTTTGGGGAAATGCTGATCGACTTCGTCCCCGACAGTGCCGGCGTTTCCCTGGCTGAGTCCACCGGATTCCTCAAAGCTCCCGGTGGCGCTCCGGCCAATGTGGCCTGCGCCATCACCAAGCTCGGGGGTAACTCCGCCTTTATCGGCAAGGTGGGAGATGATGAGTTTGGGCACATGCTGGTGGACATACTGAAGAAGAATGGGGTGAACAGTGAGGGAGTGTGCTTCGATGCGCATGCAAGGACGGCGCTGGCGTTCGTGACGCTGAAGAAGAATGGGGAGAGGGAGTTTATGTTTTACAGGAACCCTAGCGCGGATATGCTGTTGACGGAATCTGAGCTGAACATGGGGCTGATCAAGCAGGCCAAGATCTTCCATTACGGATCCATAAGCTTGATATCGGAGCCATGCAGATCGGCTCATATGGCAGCCATGAAAGCAGCTAAGGAGGCCGGGATCTTGCTGTCGTATGACCCCAATGTCCGGTTGCCTCTCTGGCCGTCAGCTCAGGCCGCCATTGATGGCATCAAGAGCATCTGGAACCACGCTGATTTTATTAAGGTGAGTGATGATGAGGTGGGTTTCTTGACACAAGGAGATGCAGAAAAGGAAGACGTGGTGCTGTCACTGTGGCATGACAACCTCAAGCTGCTTGTGGTCACTGATGGTGAGAAGGGTTGCAGATACTTCACCAAGGGGTTCAAAGGGAGAGTGGAAGGCTTCTCAGTGCAAACAGTTGACACAACAGGGGCTGGTGATGCTTTTGTGGGTGCTCTTTTGGTTTCCATTGCCCAAGACCCTTCCATATTTCAGGATGAGGGGAAACTGAAGGAGGCACTGAAATATGCTAATGCATGTGGAGCAATTTGCACAACTCAGAAAGGAGCAATACCAGCACTCCCAACCAATTCAGATGCACTTGACCTTGTTAACAAATCCAAGGCCAAATAG 987 0.5218 MTITSKSPLVVAFGEMLIDFVPDSAGVSLAESTGFLKAPGGAPANVACAITKLGGNSAFIGKVGDDEFGHMLVDILKKNGVNSEGVCFDAHARTALAFVTLKKNGEREFMFYRNPSADMLLTESELNMGLIKQAKIFHYGSISLISEPCRSAHMAAMKAAKEAGILLSYDPNVRLPLWPSAQAAIDGIKSIWNHADFIKVSDDEVGFLTQGDAEKEDVVLSLWHDNLKLLVVTDGEKGCRYFTKGFKGRVEGFSVQTVDTTGAGDAFVGALLVSIAQDPSIFQDEGKLKEALKYANACGAICTTQKGAIPALPTNSDALDLVNKSKAK* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2102 328 PANTHER HEXOKINASE FAMILY MEMBER 9 319 - -
Vvi18g2102 328 FunFam Probable fructokinase-2 6 326 - -
Vvi18g2102 328 Gene3D - 6 328 IPR029056 -
Vvi18g2102 328 Pfam pfkB family carbohydrate kinase 9 314 IPR011611 -
Vvi18g2102 328 CDD bac_FRK 9 309 - -
Vvi18g2102 328 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 259 272 IPR002173 GO:0016301
Vvi18g2102 328 SUPERFAMILY Ribokinase-like 10 318 IPR029056 -
Vvi18g2102 328 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 40 64 IPR002173 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2102 Vvi-Chr18 29115681 29117652 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2102 K00847 - vvi:100262010 644.039