Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2101 ATGCCTTCCAAGTTCACAAAATTAGCGAGTAGCAATGCAGCAGCAGTCGTGATACTACTACTTTCTGTGGCTCTAGTAGTTTTTACGAGTAATATGACAAAACCCAATCCCCAAGAAGCTTCAACGGCGATCATCGAGATTTTTGGAGTGAAGATTCACAGGAACCCTCCTCAGGCCACACTCACCGATCTGGGTGTCACTTCTTGGAAAAAGTGGGGATGCTCTCCAAGCAAATTCCCATGGACATTTGAAGCTAAAGAGACAATGTATCTGCTGGAGGGAAAAGTGAAGGTTTACTGTGATGGGCATGATGGATTCTTTGAAATTGGAGCGGGTGATTTGGTTGAGTTCCCCAAAGGAATGAAAGTCACTTGGGATGTCACTGAAGCTCTGAACAAGCACTACTCCTTGGAGAAGTAA 420 0.4476 MPSKFTKLASSNAAAVVILLLSVALVVFTSNMTKPNPQEASTAIIEIFGVKIHRNPPQATLTDLGVTSWKKWGCSPSKFPWTFEAKETMYLLEGKVKVYCDGHDGFFEIGAGDLVEFPKGMKVTWDVTEALNKHYSLEK* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2101 139 PANTHER OS04G0445200 PROTEIN 34 138 - -
Vvi18g2101 139 Pfam EutQ-like cupin domain 62 135 IPR008579 -
Vvi18g2101 139 Gene3D Jelly Rolls 40 137 IPR014710 -
Vvi18g2101 139 CDD cupin_TM1112-like 68 137 - -
Vvi18g2101 139 SUPERFAMILY RmlC-like cupins 54 135 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2101 Vvi-Chr18 29108018 29111124 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2101 K06995 - vvi:100256915 271.552