Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi18g2100 | ATGGCATGTTTGGGTTCAGTCAACCAGTCTGTGGTAGCACTCTCTAATAAGTTCCACAACACCAACACCCAAAGCCTCCCAACCAAACACCTGTCTTCTTTATCATTATTTAGTGGTTCTTCTTCTCCCTTATCAACAAAATCACCCAAAACCTACAAGCCAACTTACAGAGTCAACACTGGGATTGTGAGGGCAGAAGCTATGACAACTGAGAAGCTGGGCATCAAGATTGAGAGGAATCCTCCTGAGTCCAGACTCACTCAACTGGGTGTCAAATCTTGGCCCAAGTGGGGGTGTGAACCAAGCAAATTCCCATGGACGTTCACAACCAAAGAGACATGTTACCTACTGAAGGGCAAAGTGAAGGTATACCCAGATGGGGCTAATGAGTGTGTTGAGATTGGGGCTGGTGATTTGGTGGAGTTTCCCAAAGGAATGAGCTGCACTTGGGATGTCTCTGTTGCAGTGGACAAGCATTACAGCTTGGGCTAA | 492 | 0.4675 | MACLGSVNQSVVALSNKFHNTNTQSLPTKHLSSLSLFSGSSSPLSTKSPKTYKPTYRVNTGIVRAEAMTTEKLGIKIERNPPESRLTQLGVKSWPKWGCEPSKFPWTFTTKETCYLLKGKVKVYPDGANECVEIGAGDLVEFPKGMSCTWDVSVAVDKHYSLG* | 164 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi18g2100 | 163 | Pfam | EutQ-like cupin domain | 87 | 160 | IPR008579 | - | |
| Vvi18g2100 | 163 | PANTHER | OS04G0445200 PROTEIN | 41 | 162 | - | - | |
| Vvi18g2100 | 163 | Gene3D | Jelly Rolls | 63 | 162 | IPR014710 | - | |
| Vvi18g2100 | 163 | CDD | cupin_TM1112-like | 93 | 162 | - | - | |
| Vvi18g2100 | 163 | SUPERFAMILY | RmlC-like cupins | 81 | 160 | IPR011051 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi18g2100 | Vvi-Chr18 | 29105405 | 29106039 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi18g2100 | K06995 | - | vvi:100244771 | 311.227 |