Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2098 ATGAGTGTGACAACGCTAACTTTCTTCCCCATCTCCAAACCCTTCTCCATCTTCCATATTCACACCTCCATTTCTCTCAGAATCAACCCTTGGCCACCAATACGACGTCGAATGGTCTCCAAAGCATCTCACAGTGCCCACCTTGGTTTAGCCGTTCAGGACGATTTCCACGCTTTTTTGGAGATTCTTCCTTGTGATTTGCGTAACAATCTTCTGAATGAACCGAAAAGAGCTCAACTTCTAGAGGTCATTTTGGATCTGGGTCGGTTGCCAGAAGCTCGCTATTTGGGTGACTGCGGTGGCAAGTATTTGAGGGATACTCAGGTATCAATGGAAGAATTGGAGTATGCTCAAAATGCTGTCGGGGAATTTGGAGGGGACAATAGAGCTGGCATTGAGGGTACCTTGCACAGGATATCTGCAATCAGGAGTAGGAATGGAGTGATAGTTGGTTTGACTTGCCGAGTTGGTAGGGCTGTCAGTGGTCATGTTGATATGATCCGTGATCTGCTTCCATTTGGGGAGAGCATCCTGTTTGTTGGGAGGCCTGGAGTTGGTAAGACCACTGTTATGAGAGAGATTGCACGGGTCTTGTCCGATGAGCTTAACAGAAGAGTGGTGATTGTTGATACTAGCAATGAAATAGGAGGGGATGGGGATATTCCACATGCTGCAATAGGAGGCGCAAGAAGAATGCAGGTTCCTGAACCCTCCATGCAACACAGGATCATGATTGAAGCTGTAGAGAATCACATGCCTGAGGTGATCATTGTTGATGAGATAGGCACAGAAGCCGAAGCTCTTGCTTGTCGTTCTATTGCTGAGAGAGGCATCATGCTTATTGGTACTGCTCATGGAGAGCGGCTTGAGAACATAATAAAGAATCCCACTCTTTCTGATCTGGTTGGGGGAATAGAAACTGTTACTTTAGGAGATGCTGAAGCTCGTGCTAGAAGATGTCAGAAAAGCATTCTTGAACGGAAAGCTCTTCCAACATTTCCTTTCTTGATTGAGATGAGAGAAAGACACTATTGGGTTACGCATTGGACACAAAGGAGTGTGGATATGTTGCTTCATGGAAAAAGGCCACTGGTTGAGGTCAGGAGGAGGAATGATCAGTTCGAGGTTGTAATTGAGAGAGGTACATATGATGGATCTGAGATTTAG 1167 0.4584 MSVTTLTFFPISKPFSIFHIHTSISLRINPWPPIRRRMVSKASHSAHLGLAVQDDFHAFLEILPCDLRNNLLNEPKRAQLLEVILDLGRLPEARYLGDCGGKYLRDTQVSMEELEYAQNAVGEFGGDNRAGIEGTLHRISAIRSRNGVIVGLTCRVGRAVSGHVDMIRDLLPFGESILFVGRPGVGKTTVMREIARVLSDELNRRVVIVDTSNEIGGDGDIPHAAIGGARRMQVPEPSMQHRIMIEAVENHMPEVIIVDEIGTEAEALACRSIAERGIMLIGTAHGERLENIIKNPTLSDLVGGIETVTLGDAEARARRCQKSILERKALPTFPFLIEMRERHYWVTHWTQRSVDMLLHGKRPLVEVRRRNDQFEVVIERGTYDGSEI* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2098 388 PANTHER KINASE-RELATED 52 371 - -
Vvi18g2098 388 CDD AAA 171 293 - -
Vvi18g2098 388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 316 IPR027417 -
Vvi18g2098 388 Gene3D - 155 359 IPR027417 -
Vvi18g2098 388 Pfam Sporulation stage III, protein AA 176 302 IPR045735 -
Vvi18g2098 388 SMART AAA_5 173 329 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2098 Vvi-Chr18 29077332 29084742 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2098 - - vvi:100256808 773.852