LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi18g2093	ATGAGGATCAAAATGTGGCTGCCATTATTGTTGCTCTTAAGCCTCTTATGCCCATGCACACAACAACCAATACCACCACACTGTCCAGATAAATGTGGGAAGGTATCAGTTCCTCACCCATTTGGGATTGGAAATGTGAAATGTGCCAGGGATGACAAGTTCCTTCTGCACTGCAACAATGGTCAGCCGTGGTTGCTTGATTCCATTCCTGTTCGCCATATATCATTAGATGGTACGGTGACTGTCACCATGAAGACCCAACGGCAATGCTACAATGATAGCATGAAGGCAAAAAAATTCTACCATTTTCTGGAATATCGGAGGGGGTGCTATTCGTTCTGTGATGGGCCTGGGCAGCAAGTAGAGTCCTCTTGCTCTGGCATCGGATGTTGCCAGTTCTCCATTGACAACCAACTAGATCATTTGAATCTCACCGTCTTTAGAATGAATGACTCCCCCCTTCCCAATGATAAATTTTGCCTAAACGCCTTTCTTACCACCAAGTCTGCTTTTAATATTGCCGGAGCAAATCTCTCCGCGCTCCTCAACTATCTTGAACCTTCAGAAGTGATCCTTGACTGGGTTGCAGGGAATGAGACGTGTCAAGCAGCTAGAAACTGCTCAGGAACATATGCATGTGGAGAAAACACTGATTGCTTAGACTCTACCAATGGCCCTGGATATCGATGCTATTGCAATCTAGTCAACTGGTTGAGATGA	720	0.4542	MRIKMWLPLLLLLSLLCPCTQQPIPPHCPDKCGKVSVPHPFGIGNVKCARDDKFLLHCNNGQPWLLDSIPVRHISLDGTVTVTMKTQRQCYNDSMKAKKFYHFLEYRRGCYSFCDGPGQQVESSCSGIGCCQFSIDNQLDHLNLTVFRMNDSPLPNDKFCLNAFLTTKSAFNIAGANLSALLNYLEPSEVILDWVAGNETCQAARNCSGTYACGENTDCLDSTNGPGYRCYCNLVNWLR*	240

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi18g2093	239	Pfam	Wall-associated receptor kinase galacturonan-binding	28	82	IPR025287	GO:0030247
	Vvi18g2093	239	PANTHER	OSJNBA0016N04.9 PROTEIN	107	233	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi18g2093	Vvi-Chr18	29039948	29040765	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi18g2093	1	233	Receptor kinase-like Gene Family	AT1G21250	26.740	1.67e-19	85.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi18g2093	-		-	vvi:100241421	233.032