Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2085 ATGAGGGGAAAACTGGTTCCGGGAAAAGCCATTTTCATTCTATGCATGGCTAGCTTTCTTGCAGGGTCGCTCTTCACTACCCGGACATGGACACACCGTTCCTATTCCTGTAACAATGACCGTCAACTTCAATTCATCCCCAACAAGGTGGCCTTGTCCAGAACAGGATGCGATCAGAATCGGAAGCTGATACAAGGAGATGATCACTCAGAAGATATAATGGGAGAAGTCACAAAGACGCATCAAGCTATTCAATCGCTGGATAAGACAGTTTCAACGGTAGAAATGGAACTAGCAGTGGGCCGGACCAGCCAGACCGGCCACCAGGTTTCCCAAGACACCCCACAGAATCTGCGGAAAGCTTTTGTTGTGATAGGGATTAACACTGCGTTCAGCAGCAGGAAACGCCGGGACTCGCTCCGGGAAACATGGATGCCGAGAGGTGGAGCCAAGCGCGCAAGATTGGAGAAGGAGAAAGGGGTGATTATCCGGTTTGTGATCGGACACAGCGCGACGCCGGGCGGGGTTCTGGACAGGGCCATAGACGCGGAGGAGGAGGAGAACAAGGACTTTCTTAGGCTGAACCATGTGGAGGGATACCATGAGCTCTCAAGCAAGACCCGGTTGTATTTTTCCACTGCGGTTTCGATGTGGGATGCAGATTTTTATGTTAAAATAGATGATGATGTGCACCTAAACGTGGGTATGCTAGTGAGAACACTTGCAAGGTATAGGTACAAACCTAGGATCTACATTGGATGCATGAAGTCAGGACCAGTTCTCTCTCAAAAAGGGGTGAAATATTACGAGCCAGAGTTCTGGAAATTTGGAGAGGAAGGGAACAAGTATTTCAGGCACGCCACTGGTCAAATCTATGCAATTTCGAAGGATCTAGCGGCCTACATTTCAATCAACGCGCCCATTCTACATAGATATGCCAATGAAGATGTTTCTCTGGGGTCATGGTTCATTGGCTTGGAAGTAGAGCACGTTGATGACCGTATGATGTGTTGTGGGACCCCTCCAGATTGCGAATGGAAGACACAAGTTGGAAATGTATGTGTGGCATCCTTTGATTGGTCGTGCAGTGGAATATGCAAGTCTGTGGAGAGGATGAAGGATGTGCACAACACTTGTGGAGAAGGAGACGGGTTTGTTTGGAATGTTGAGCTCTAA 1176 0.4855 MRGKLVPGKAIFILCMASFLAGSLFTTRTWTHRSYSCNNDRQLQFIPNKVALSRTGCDQNRKLIQGDDHSEDIMGEVTKTHQAIQSLDKTVSTVEMELAVGRTSQTGHQVSQDTPQNLRKAFVVIGINTAFSSRKRRDSLRETWMPRGGAKRARLEKEKGVIIRFVIGHSATPGGVLDRAIDAEEEENKDFLRLNHVEGYHELSSKTRLYFSTAVSMWDADFYVKIDDDVHLNVGMLVRTLARYRYKPRIYIGCMKSGPVLSQKGVKYYEPEFWKFGEEGNKYFRHATGQIYAISKDLAAYISINAPILHRYANEDVSLGSWFIGLEVEHVDDRMMCCGTPPDCEWKTQVGNVCVASFDWSCSGICKSVERMKDVHNTCGEGDGFVWNVEL* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2085 391 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 90 337 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vvi18g2085 391 Pfam Domain of unknown function (DUF4094) 8 103 IPR025298 -
Vvi18g2085 391 Gene3D - 110 337 - -
Vvi18g2085 391 FunFam Hexosyltransferase 115 337 - -
Vvi18g2085 391 Pfam Galactosyltransferase 135 333 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2085 Vvi-Chr18 28928371 28931032 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g2085 4 391 Glycosyltransferase AT1G77810 62.887 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2085 K20855 - vvi:100241318 801.971