Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2083 ATGGGGGGACGAAAGTGGGAGGACTTAAACATGGACTGTTTGGTGAATGTGTTTCACAAAGTGGGGATAGAATCGTTGTTGTTGGATGTTCCCCGTGTATGCAAGTCATGGCATAAAGCGAGCCTCGATCCCAAGTGTTGGGAGTCTCTCATTTTTCCTGAAGACATCAGGTTTTTGGTCCTCGACAGGAGACATAGGATGAGGGGAATTCTAGCCCAGATTGCCCTTCACTGCAATAACTTCATGAGGCTATCAGCTCCAGGAATCAATGTTGGCTACTGGGAAGCATCAGCCATTGTCACCTTACTACCAAACCTTAGGTACTTGGTTCTAAAGGGGGCAACCATTCGGCAGAAAAGGGTAGTGATGATCTTGCAGGGCTGCAAACAGCTTGTGCATTTAGATGTCAGGGGCTGTACTGGTTTTGATGAGGATGATGCTGAGATTCTGGAGCTTGCTTCTCATATTCCTTCCTTCATGTGTGAAGGTTCGCGCCGTAATGAAAATGTGTGCTCCATAAAACACAAAAAGAAAACTCTCACTCATTTCATACACTTTACTGTCTCTCTCAAAAGAGTTGCTTCAGTTGGTCATCAGCTTCAGATTATGACTGCAACTGGTGTGGCAGTGCATTGTTATTGGAACGGGCGAGTGAAAAAGGAAAAGGGCGATGTTGATTATGAAGGTGACAATGTCAACATCATGCCTGTTAAGCTCAACTATGGAACTACCTATGCTGAATTGTTGGATAAAATCTATACAATCACAGGCATTGACAGATGGGGTTTTGAGTTGAACATCATATGCAGATATCCTATATCTTCACGGGAATATAAACCGATCCCAATAAAGAATGATGAGGCTGTGGAACTGATGTTGGAGGTCCCAATCAGATCAGGGGTGTTCTGTGTAGAAATATATTTGGAGACTAATGCGGTCAATAAACCATTTCATGTTGAAGCAAATGCACCAGCAAATGTGCAAATATCTCCTTTGAGTCATTTGCTAAAAGGAGAGTGTAATGCGGTCTATTCAAACGATTGGGAGACATCATCCAAGCATTCAAATGATTCTCCTAAAAAAGACGATAACCAGATGGAGGGACGAAAGTGGGAGGAGTTAAACAGGGACTGTTTGGTGAATGTGTTTCAAAAAGTGGGAATGGAGTCAATGTTGTTGGATGTTCCCCTTGTATGCAAGTCATGGCATAAAGCGAGCCTCGATCCTAAGTGCTGGGAGTTTCTCATTTTTCCTGAATATATCGAGCCTGATGATATATGGGGGAGGGGCCCCTTTGCAGAAAGGTTTATGCTGGAATTTCAATTCTCTGTCACTGCATTCATAAAGTTTGTAATCGACCGTAGCTGTGGACATGCCACTGCACTTAGCCTCCCCATCTGCTGCACCGAAGAGGCATTCAAGTATGCTGCTAACAAGTGTCCTAAACTAGAGCTTTTGGGATTGAATGCTGGTCTACTTCACAAGCATTCCAGTATTATCCCAAAATTGATATCCAAGTGGAAAAATCTGCAATCGTTGGTACTTGGGAGCAGTCATGGCATGGAGGAAATCCTCACCCCAATTCGTCTTTTCTGCAGAAACTTCACAAGGCTATCAGCTCCAAAAACGAATGTTGGCAACAAGGAAGCATCAGCCATTGTCACCTCGCTGCCAAACCTTAGGTATTTGGTTCTAAATGGAGCATCCATTGAGCAGGAAAGTTTAGTGATGATATTGCAGGGCTGCAAACAGCTTATCGAGATAGATGTGAGGGACTGTGATGGTTTTGATGAGGATGATGCTGAGATACTGAAGCTTGCTTCTCATATTCCTTCATTCATGTGCAAAGGTTCGTACCTTTATGACCCCTTCGATGACTATGAGCATACCCAAATAGATCACAATTACCGTGTTTATGGTTATGGTTGCTGTTATGATTATGATTGA 1947 0.433 MGGRKWEDLNMDCLVNVFHKVGIESLLLDVPRVCKSWHKASLDPKCWESLIFPEDIRFLVLDRRHRMRGILAQIALHCNNFMRLSAPGINVGYWEASAIVTLLPNLRYLVLKGATIRQKRVVMILQGCKQLVHLDVRGCTGFDEDDAEILELASHIPSFMCEGSRRNENVCSIKHKKKTLTHFIHFTVSLKRVASVGHQLQIMTATGVAVHCYWNGRVKKEKGDVDYEGDNVNIMPVKLNYGTTYAELLDKIYTITGIDRWGFELNIICRYPISSREYKPIPIKNDEAVELMLEVPIRSGVFCVEIYLETNAVNKPFHVEANAPANVQISPLSHLLKGECNAVYSNDWETSSKHSNDSPKKDDNQMEGRKWEELNRDCLVNVFQKVGMESMLLDVPLVCKSWHKASLDPKCWEFLIFPEYIEPDDIWGRGPFAERFMLEFQFSVTAFIKFVIDRSCGHATALSLPICCTEEAFKYAANKCPKLELLGLNAGLLHKHSSIIPKLISKWKNLQSLVLGSSHGMEEILTPIRLFCRNFTRLSAPKTNVGNKEASAIVTSLPNLRYLVLNGASIEQESLVMILQGCKQLIEIDVRDCDGFDEDDAEILKLASHIPSFMCKGSYLYDPFDDYEHTQIDHNYRVYGYGCCYDYD* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2083 648 Gene3D Ribonuclease Inhibitor 44 195 IPR032675 -
Vvi18g2083 648 Gene3D Ribonuclease Inhibitor 443 617 IPR032675 -
Vvi18g2083 648 Gene3D - 5 43 - -
Vvi18g2083 648 Gene3D - 370 412 - -
Vvi18g2083 648 SUPERFAMILY F-box domain 6 88 IPR036047 GO:0005515
Vvi18g2083 648 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 68 162 - -
Vvi18g2083 648 SUPERFAMILY F-box domain 371 428 IPR036047 GO:0005515
Vvi18g2083 648 SUPERFAMILY RNI-like 71 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2083 Vvi-Chr18 28905474 28917298 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2083 - - vvi:100258440 925.235