Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2081 ATGGGGAGTGTATTTGGGTGCGGACGCGTATCCTTCGGTGAAAGCCCGAGAACAATAGTGCATTGTATGATTATGGAGGAGAGAAAATGGGAGGAGTTAAACATGGATATTTTAGTGAATGTGTTTGGAAGAGTGGGAATGGAGTCGTTGTTGTTGGATGTTCCCTTTGTATGCAAGCCTTGGTATAAAGCGAGCCGCGAACCTCAGTGCTGGGAGCATCTTATTTTTCCTGAATACATCAAACCTGACGATATATGGGGAAAATACAGCCCCGACAGGGGCTTTTCAGAGAGGTTAGTGACTACATATCAAGAAAACTTGTCTGTCACTGCATTCATGAGGTTCATAGTTAACCGTAGCTGTGGATGTGCCACAATCATCAAACTCCCCAGACACTGCACCGAGGAGGCACTGGAGTATATTGCAAACGAGTGTCCCAGATTAAAGGGTTTGGATGCGGTTTTTCATGTAGGGCTATTTTACATGAAATCTGTCCTACCACAGATCGGTCTTCACTGCAACAACTTCATTTGGCTATCAGCTCGACGTGCCGGCATTAGGAAATATGTAGCATCAGCCATCGTGGCCTCACTGCCAAGACTCGAGTACTTGGATATACCTTACACATTTTTTGAGAGGGAAGCTCTAGTGATAATATTGCAGGGCTGCAAAAAGCTTGTTTATTTAGACGTCAGGAAGTGCTTTGGTTTTTGTGATGATGATGCGGAGATATTGGAGCTTGCTTCACATATTCCTGTATTCATGTGTGAAGGGTCGCGCATTAGATAG 789 0.4461 MGSVFGCGRVSFGESPRTIVHCMIMEERKWEELNMDILVNVFGRVGMESLLLDVPFVCKPWYKASREPQCWEHLIFPEYIKPDDIWGKYSPDRGFSERLVTTYQENLSVTAFMRFIVNRSCGCATIIKLPRHCTEEALEYIANECPRLKGLDAVFHVGLFYMKSVLPQIGLHCNNFIWLSARRAGIRKYVASAIVASLPRLEYLDIPYTFFEREALVIILQGCKKLVYLDVRKCFGFCDDDAEILELASHIPVFMCEGSRIR* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2081 262 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 26 252 - -
Vvi18g2081 262 SUPERFAMILY RNI-like 125 240 - -
Vvi18g2081 262 Gene3D - 25 74 - -
Vvi18g2081 262 SUPERFAMILY F-box domain 30 121 IPR036047 GO:0005515
Vvi18g2081 262 Gene3D Ribonuclease Inhibitor 106 256 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2081 Vvi-Chr18 28865934 28867784 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2081 - - vvi:104877454 498.049