Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2080 ATGGCTGTGACGGGTGTTGCAGTGAATTGCTATTGGAACGGGAGAGTGAAAAAGGAATCGAATGATGTTGTTTACGAAGGTGCCAAGGTGAATGTCATGCCTATTAAGGTGTTCCATGGAACTACCTATGCTGGATTGTTGGACAAAATCTATGCAACCACCGCCATCGACAGACAGAATTTTGAGTTGAACATCATATGCAGATATCCTATTTCTTCACAGGAGTATAAACCGATCCCTATAAAGAATGATGAGGGGGTGGAACTTTTGTTGGAAGTGCCCAGCAGATCTGGAGTGTACTGTGTAGAAATATATTTGGAGGAAGAACCAGCACCCTTACGGGTACTTGAAGCAACTGCTTTGCTAACAAAAGAGACTAATGCAGTGGAGGTGGGTGATGATGGTAAAAATAATGGGGAGACTTCATCCAAGCTCTCAAATGATTCTCCCAAAATTGACGACAACAAAGTACTGATTGGGGATCGAAGAAAGTGGGAGGAGTTAAACATCAACTGTTTGGTGAATGTATTTCAGAAAGTGGGAATGGAGACACTGTTGTTGGATGTACCCTTGGAATATCAAAATGAAATTCCTATCACTTCATTCATAAAGTTCATCGTCAATCGCAGCAGTGGATGTGCTACTACTCTTATGCTGCCCTACCGCTGCAGTGAAGAAGGGTTGGAGTATGCTGCTAAGCAGTGTCCTGCTTTAAAGGTTTTCGGTCTCCATGGTTGTCTATCTCTCAAAAATGCAAGTGTCATTCCCAAGCTGATCAGAAACTGGAAAAATCTTGAAGTATTGAGACTGATGTGGGCCCCCCATTATGTACCAGAGATCCTCATTCAAATCAGTCTTCATTGCAAGAATTTCTTTCAGCTAATGCTTCCAAAGTCCTACGTGGGGGCCAATGAAGCGTCCGCCATTGTCACGCATCTGCCAAAGATTAAGCACTTGTCTCTAAAAGGAGCAACCATTGAGAAGAAGAATCTAGTGATGATACTGCGGTGCTGCAGAGAGCTTGTGAGGTTAGACGTGAGGGACTGCTTTCTTTTTGAGGAGAGTGATGCTGAGATATTGGAGCTTGCTTCACATATTCCGTCATTCAGGTGTGAAGGATCAACCCATATAAACAATTATGAGGTCAGAGAACTCCATATTGCTTTACGCAGAATGGGGAGAAACAATTTTTCTTTTGGTGAATGGGACAACCCATTTGATTGGAACTTTGTGAGCTGA 1239 0.4294 MAVTGVAVNCYWNGRVKKESNDVVYEGAKVNVMPIKVFHGTTYAGLLDKIYATTAIDRQNFELNIICRYPISSQEYKPIPIKNDEGVELLLEVPSRSGVYCVEIYLEEEPAPLRVLEATALLTKETNAVEVGDDGKNNGETSSKLSNDSPKIDDNKVLIGDRRKWEELNINCLVNVFQKVGMETLLLDVPLEYQNEIPITSFIKFIVNRSSGCATTLMLPYRCSEEGLEYAAKQCPALKVFGLHGCLSLKNASVIPKLIRNWKNLEVLRLMWAPHYVPEILIQISLHCKNFFQLMLPKSYVGANEASAIVTHLPKIKHLSLKGATIEKKNLVMILRCCRELVRLDVRDCFLFEESDAEILELASHIPSFRCEGSTHINNYEVRELHIALRRMGRNNFSFGEWDNPFDWNFVS* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2080 412 Gene3D Ribonuclease Inhibitor 145 398 IPR032675 -
Vvi18g2080 412 MobiDBLite consensus disorder prediction 130 149 - -
Vvi18g2080 412 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 162 367 - -
Vvi18g2080 412 SUPERFAMILY RNI-like 229 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2080 Vvi-Chr18 28858729 28861355 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2080 - - vvi:104877453 457.603