Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2078 ATGTGCTACTACTCTTATGCTGCCCTACGCTGCAGTGAAGAAGGGTTGGAGTATGCTGCTAAGCAGTGTCCTGCTTTAAAGGTTTTCGGTCTCCATGGTTATCTATCTCTCAAAAATGCAAGTGTCATTCCCAAGCTGATCAGAAACTGGAAAAATCTTGAAGTATTGAGACTGAGGAGGGCCCCCCATTATGTACCAGAGATCCTCATTCAAATCAGTCGTCATTGCAAGAATTTCTTTCAGCTAATGCTTCCAAAGTCCTACGTCGGGGCCAATGAAGCGTCCGCCATTGTCACATATCTGCCAAAGATTAAGCACTTGTCTCTAAAAGGAGCAACCATTGAGAAGAAGAATCTAGTGATGATACTGCGGTGCTGCAGAGAGCTTGTGAGGTTAGACCTGAGATATTCCTTCATTCAGGTGTGA 426 0.446 MCYYSYAALRCSEEGLEYAAKQCPALKVFGLHGYLSLKNASVIPKLIRNWKNLEVLRLRRAPHYVPEILIQISRHCKNFFQLMLPKSYVGANEASAIVTYLPKIKHLSLKGATIEKKNLVMILRCCRELVRLDLRYSFIQV* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2078 141 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 11 136 - -
Vvi18g2078 141 Gene3D Ribonuclease Inhibitor 3 140 IPR032675 -
Vvi18g2078 141 SUPERFAMILY RNI-like 17 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2078 Vvi-Chr18 28823586 28824407 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2078 - - vvi:104877453 242.662