Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2070 ATGGAGAGGGCGAAGTGGGAAATCATTCACATACCAGAAAAGCCACCTGTTTCGCCCACCCATCAACCCACTGTGGATGTGCTTGCTTCAGTGATTGATCCTAAGCTCGCCAACACACTTGTAAGGCGATTAAATCAAATAGCACCCCTGGAAAATTTCCGCCATGTGAAACGGATACAAAAGAAGCACATGCAGGGAGGAAAAACACAGTTAGCCATAATCTTATGTTTAGCTTCTGAAAATGAAAATCCACTGGACGGCATACCAAATGATGTACTCGAGCTAATCAATTCCTACCAGTTGAGTGCTTTCATTACAAAAGTTTGCAAATATGCTGCATTATCGAAAGAAGAGTGGGAAGAGCAATGCAAGCTATGGCCAACATCATATCATCCACCAACCTACAATATTGAGGGCATTGCTGGATTTAGTGAAGAGGATTCACAATCAGTTTTCAGCTTCATGAAATCTGCTGTTAAGTTGGCAAAATCAGATGATGGTCAGGTAGTAAATGCTGCAGTGATAGTGGATCCATTAGTTAAACAGATAATTGTGAGTGCATGTGATGAAATCTGCTCTTGGCACACCCCCATGGACAAGACTAGTGTGGAAGCCAGTTGCCTTGAACAGCCAGACATTGCTACTTCCCAAGGTGTTGTCAATGGAGTAGTGAGCCATGAAACTCTGCTTTCAAAAGGTCCACCTGATGAACCCAAACAATTATATACTGGTGTTTCTTGTTTATATCCTTGGCGATGGGCTGAACATCAATCACATGCAAGTTCTTATTGGCATCCTTTACGTCATGCGGCCGTTGTTGCTATTGAGTATTCAGCTGCCAGGGACAGGCGCCTTTTCCCTGGTTTGGGACAGATTGGCAATCAGTCTAACCAACTGGATCATACACTATCAGCTTCCATAAGCTCTCAGGCAAAACGACAAAAGACCAATCTTAAAAAGGTTGAGGATGTTGAGAAACTGGATGCTCATTGCAATGGGTTTCATTCTGATGCAGCCAGGCCTTATCTGTGCACTGGTTATGACATTTATCTTGTTTGGGAGCCATGTGCTATGTGTGCAATGGCGCTGGTCCATCAAAGAATTAGGCGTATCTTCTACGCTTTTCCAAATCCCAATGCAGGTGCACTGGGCAGTGTTCATAGACTTCAAGGGGAGAAAAGCTTAAATCATCACTATGCTGTTTTCAGAGTTTCGTTGCCTGAAGAAATCCTTGATGGAGGGGATCACCATTTTGACATCCATATAAATCTCACCGGACTGTACACCAAGACACTTGCTTATGATGAGAGTGAGAATGACGACAAGAAAGGATAA 1335 0.4337 MERAKWEIIHIPEKPPVSPTHQPTVDVLASVIDPKLANTLVRRLNQIAPLENFRHVKRIQKKHMQGGKTQLAIILCLASENENPLDGIPNDVLELINSYQLSAFITKVCKYAALSKEEWEEQCKLWPTSYHPPTYNIEGIAGFSEEDSQSVFSFMKSAVKLAKSDDGQVVNAAVIVDPLVKQIIVSACDEICSWHTPMDKTSVEASCLEQPDIATSQGVVNGVVSHETLLSKGPPDEPKQLYTGVSCLYPWRWAEHQSHASSYWHPLRHAAVVAIEYSAARDRRLFPGLGQIGNQSNQLDHTLSASISSQAKRQKTNLKKVEDVEKLDAHCNGFHSDAARPYLCTGYDIYLVWEPCAMCAMALVHQRIRRIFYAFPNPNAGALGSVHRLQGEKSLNHHYAVFRVSLPEEILDGGDHHFDIHINLTGLYTKTLAYDESENDDKKG* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2070 444 Gene3D Cytidine Deaminase, domain 2 142 416 - -
Vvi18g2070 444 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 153 374 IPR002125 -
Vvi18g2070 444 SUPERFAMILY Cytidine deaminase-like 124 411 IPR016193 GO:0003824
Vvi18g2070 444 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 262 386 IPR002125 -
Vvi18g2070 444 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 136 410 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2070 K15442 - vvi:100256903 851.277