Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2066 ATGGTCAATTGGTGTCGCAGCATCTTCGCCACACTCGTATTGCTGAGTGTCTTGTTGGGGATGAGACTAGGGCGATCATCTTCACTGCTCGTAACGATCAAGAAGTTAACATCAATGATGTTTACTACCTTTGAGGCTTGGCTCAAGTGGCAAGAGTTTGGATTGGGGACTGTGGAGGTCTTGGTTGATATGATAAAGTCGGGCGCCACTGTGATTCTGTACAAAGCAAAGATTGACATGTTTAAGGGATCAATGAGGCTAGCAGTTGACAAATGGGGACGTGTTGAAGTGACCAAGGATGCTAACTTTGTAGTTAAAGAGCAGAACAATCTTTCGCTAGTTGAGTACGAATTGGTTAATGTGTTGGAAGAGTGA 375 0.4427 MVNWCRSIFATLVLLSVLLGMRLGRSSSLLVTIKKLTSMMFTTFEAWLKWQEFGLGTVEVLVDMIKSGATVILYKAKIDMFKGSMRLAVDKWGRVEVTKDANFVVKEQNNLSLVEYELVNVLEE* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2066 124 SUPERFAMILY Nucleic acid-binding proteins 62 121 IPR012340 -
Vvi18g2066 124 Gene3D - 37 113 IPR012340 -
Vvi18g2066 124 PANTHER OS05G0244600 PROTEIN 61 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2066 Vvi-Chr18 28630411 28632836 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2066 - - vvi:100241314 95.1301