Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2065 ATGACCCATTACCCTTACGGCAAACAATATCTATATGGGAGTAGGAAACTTCCTGGTAATAAAACACTCAACTTATATCTTTGTTGCTTTTCATTTCAGGTTGTTGAGAGCATTATAAATTGTCTCAATATTTCTTCTGATCCCGCAACTTTTATTCAGGGTGCATTTCCAGAGATCCTGGAGAAAACAAAAGAGGATTTCTTCTCAAACACTATCATCATACTTGGAGAATGTGCAGACATAATTCATGAGAGAATCAAGGATATCCCCTGCATTACTTGCCCGCAAAAGCCGGAAGGATCCATGTTTGTAATGGTCAAGCTGAACCTGTCTCTATTGGAAGACATTGATGATGATGTAGAGTTCTCTATGAAGCTGTCTAAAGAGGAATCAGTGATTGTCCTTACAGGTAAGAAGCAAGCAACCTTGGTTAGCTTAGGATGCTCCGACCCAACTCGATGTTTGGACAGACTTGAGTCAAATTTTTTCAACCTAACTCATTTTGGGTTAGACATGGGTTAA 522 0.3927 MTHYPYGKQYLYGSRKLPGNKTLNLYLCCFSFQVVESIINCLNISSDPATFIQGAFPEILEKTKEDFFSNTIIILGECADIIHERIKDIPCITCPQKPEGSMFVMVKLNLSLLEDIDDDVEFSMKLSKEESVIVLTGKKQATLVSLGCSDPTRCLDRLESNFFNLTHFGLDMG* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2065 173 Gene3D Aspartate Aminotransferase, domain 1 43 160 IPR015422 GO:0003824
Vvi18g2065 173 SUPERFAMILY PLP-dependent transferases 43 147 IPR015424 -
Vvi18g2065 173 PANTHER TYROSINE AMINOTRANSFERASE 32 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2065 Vvi-Chr18 28628582 28629416 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2065 K00815 - vvi:104882696 202.601