Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2060 ATGACTGAAACGGGTGCCATTGATGCTTTGCTGGACCTCCTGAGATCTCATCAGTGCGAAGAGCCTGCTGGAAGATTACTTGAGGCTGTATTTAACAATGTGAGAGTACGAGAGGTGAAAGTCCCCAAGTATGTGACAGCACCTTTATCACAGTATCTGTTAGATCCACAGACCAGATCACAATCTGGTAGGCTTCTTGCAGCTCTCGCTCTTGGTGACCTCCCTCAATATGAAGGATTCGCTAGAGCTAGTGGTTTTGTATCAGCATGTCGTGCACTGATAAGCCTGCTTGAAGACCAACCAACAGAAGAAACGAAATCCATTACCTATCAGAAAGACCTGTCTCAAATCCGTCCAACAGAAGCTGAATCGGTTGAAACTCGAATCATCATACTTTTCTCCTCTGTTGTGGCTCTCAAGAGGTCTTTATTTGACACCAGAAGCAATCCCACTTCTGAATCTGTAGTTAAGCCCTTTGCTGAGAGAGAAGTGACTTCTTTTGGTTTGATTGCACACCTTGGAAGTTAG 528 0.4489 MTETGAIDALLDLLRSHQCEEPAGRLLEAVFNNVRVREVKVPKYVTAPLSQYLLDPQTRSQSGRLLAALALGDLPQYEGFARASGFVSACRALISLLEDQPTEETKSITYQKDLSQIRPTEAESVETRIIILFSSVVALKRSLFDTRSNPTSESVVKPFAEREVTSFGLIAHLGS* 176
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2060 175 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 1 108 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi18g2060 Vvi-Chr18 28549322 28549849 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2060 - - vvi:100260874 170.244