Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2050 ATGGCGATCTCCAGGATTGGGAAGAAGCAACCACAGCTTCAGAGACATGGGCGGAGCCAGAGATACCTAAGAATCTCATCTTTCAGATCCGTACGTTTCATCATCATATGCCTTGCCTTCATCGCTATCGTGCCCCCCATTTTCTTCCATTTTCGACTCAGACGTTTCCATCAGATGCAATTGAGAAAGTGTGGTTGGTTGAATAATCCTCCTCTTGTATGCGCTCATGGCGGTGACTCAACCAAGGCTTTCCCCAACACTATGAATGCATATCGAATTGCTCTTCATTCACAAGTAGATTGCATTGAGATTGATGTTTCTCGCTCTTCAGATGGAGTTTTGTTTGCTCTTCATGACAGGGAGTTGCAGCGGATATCTGGTAACATGACTGCCAAAGTTGGGTACTTGAGCATGAGGGAGATAAAAGAGCTGGATACCATTTATCAAATTCCCCGGGAGTATAGTGATGTAAAGATACCCACCATTGAAGATGCTCTGATGTTGATATCAGGTTCAGTTCAGCAGGTCATTCTGGATGCTAAGGTTGGGCCTCCTTCATATGAAAAAGGGCTTGCAAAGGATATTCTTTCTGCTGTTAAGGGAACAAAGTGTAGCAATTGTGTTGTGTGGGCTAAAAGCGACAGTTTATCAAGGGACGTGATCAAACTATCATCTGATGTCACGGTAGGTTATATTGTCATGAAGGACCCTTCTACTGGGGCTAGAACCAACTTACTGAGAATGAAAGCTGCCGGAATCGTCGGCGTCTACCACCCATTGATTGATGAAAAGCTTGAGGAATAA 804 0.444 MAISRIGKKQPQLQRHGRSQRYLRISSFRSVRFIIICLAFIAIVPPIFFHFRLRRFHQMQLRKCGWLNNPPLVCAHGGDSTKAFPNTMNAYRIALHSQVDCIEIDVSRSSDGVLFALHDRELQRISGNMTAKVGYLSMREIKELDTIYQIPREYSDVKIPTIEDALMLISGSVQQVILDAKVGPPSYEKGLAKDILSAVKGTKCSNCVVWAKSDSLSRDVIKLSSDVTVGYIVMKDPSTGARTNLLRMKAAGIVGVYHPLIDEKLEE* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2050 267 Pfam Glycerophosphoryl diester phosphodiesterase family 78 183 IPR030395 GO:0006629|GO:0008081
Vvi18g2050 267 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD4 12 265 IPR044236 -
Vvi18g2050 267 ProSiteProfiles GP-PDE domain profile. 71 267 IPR030395 GO:0006629|GO:0008081
Vvi18g2050 267 CDD GDPD 73 265 - -
Vvi18g2050 267 Gene3D Phosphatidylinositol (PI) phosphodiesterase 65 266 IPR017946 GO:0006629|GO:0008081
Vvi18g2050 267 SUPERFAMILY PLC-like phosphodiesterases 69 241 IPR017946 GO:0006629|GO:0008081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2050 - - vvi:100251767 520.39