Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2046 ATGTGTGGTTGTGGTGGGTTCATTGTGTCTGGATGCCTCCTGCTTGGTTTGATTTGTTTTGTTTTGGGGGCCAACACCGCTCAATTGCATTGCACTACTCTGCTTCCTTGCTTGAGGCCCAATCATAGGGAACCTCAGATCCCAGCACCTGCTCATCACTATTTAAGAGGGTTGAGAGTATGTAAAAATGATGTAGTTGTGGCTGGTGGCATGGAAAGAATGTCTAATGCGCCTAAATACCTAGTAGATGCAACAAATGGATCTCGATTAGGCCATGATACTATTGTTGATGGTATGGCCAAAGATGGCCTCTGGGATGTTTACAACGATTTTGGAATGGCAATTTGTGCAGAAATATGTGCTGATCAGCATAAGATAACAAGAGAACAACAGGTAACATACTGCTTGCAAGGGTGA 417 0.4388 MCGCGGFIVSGCLLLGLICFVLGANTAQLHCTTLLPCLRPNHREPQIPAPAHHYLRGLRVCKNDVVVAGGMERMSNAPKYLVDATNGSRLGHDTIVDGMAKDGLWDVYNDFGMAICAEICADQHKITREQQVTYCLQG* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2046 138 FunFam - 51 138 - -
Vvi18g2046 138 Pfam Thiolase, N-terminal domain 59 136 IPR020616 GO:0016747
Vvi18g2046 138 PANTHER ACETYL-COA C-ACYLTRANSFERASE 57 137 - -
Vvi18g2046 138 Gene3D - 51 138 IPR016039 GO:0016746
Vvi18g2046 138 SUPERFAMILY Thiolase-like 62 134 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2046 Vvi-Chr18 28358087 28360311 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2046 K00626 - vvi:100855181 135.961