Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2036 ATGGTCTTCTCTTCTCCAATGGTTCAAGATCATGAAGCGCAACCAAAGTGTGCAGGAATTATGATTCCCGGAAGTAGTGGAATTCCAGGGTGGGTATTGCATCAGGAAATGGAAAGAGAAGTGAGAATAGAGCTTCCTATGAATTGGTGTAAGGATAACCACTTCTTGGGATTTGTTTTGTTCTGTCTTTATCAAGATAATGGCACTGATCCATATTTAAGCTATGATTTGAGATTGCATGATGATGAGGATTCATATGAAGCTGTGCGTCGTGGATGGTTTGGTTGTCAATGTGACTATTATCCTAATATTTATAGTGGTGTATTAGATGAATTGTGGGTGACATATCATCCTAAGATTTCTATTCCAGAAAAGTACCATTCCAATCAGTTCAAGCACATTCAGACTTCATTTTCTGCTTTAACTGTTGGAGTTATCAAAAGTTGCGGGATCCATCTTATATACTCTCAAGATCATCAACAGAAAAATACCGCATTACTAGATTCTCTTGGCACTCAAGATGATGATCTTCCCGACAATTTTCAGGACAATACTGAATCAGTAGCAGAAGATACGAATGGTAATGTCAAGAGACGCAGAATAAACCCAAGCAGAGGAGCCACCCCATAA 630 0.3889 MVFSSPMVQDHEAQPKCAGIMIPGSSGIPGWVLHQEMEREVRIELPMNWCKDNHFLGFVLFCLYQDNGTDPYLSYDLRLHDDEDSYEAVRRGWFGCQCDYYPNIYSGVLDELWVTYHPKISIPEKYHSNQFKHIQTSFSALTVGVIKSCGIHLIYSQDHQQKNTALLDSLGTQDDDLPDNFQDNTESVAEDTNGNVKRRRINPSRGATP* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2036 209 MobiDBLite consensus disorder prediction 169 209 - -
Vvi18g2036 209 Pfam C-JID domain 26 159 IPR045344 -
Vvi18g2036 209 MobiDBLite consensus disorder prediction 169 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2036 Vvi-Chr18 28268158 28268879 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2036 - - vri:117906243 259.225