Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2034 ATGGCTGGAAATGAATGGATTAACGGGTACTTGGAAGCGATATTGGATGCCGGAAGTAGCAGAAATGGGCTGAGAGTTGTTGAAGATGGTGATGAGAAGAGCAACAGCAAGAATAATGGTAGTAGGAGGAGAAGATTTGTTGAGGGGAAGGTGAGAATTGGAAGGTTGGAAGAGAAGGAGAAGGAGAAGGAGGAGGTGTTTAATCCCACCAAGTACTTTGTAGAAGAAGTTGTTAATAGCTTTGATGAATCTGATCTCCATAGGACATGGATTAAGGTGATAGCAACAAGGAACTCACGTGATAGGAGCAACAGGCTTGAGAATATGTGCTGGCGCATTTGGCATCTTGCTCGCAAAAAGAAGCAGATTGCATGGGATGATGCACAGAGGCTTACAAAGCGGCGTCTTGAGCGGGAGCAAGGTCGCCATGATGCTGCTGATGACCTTTCAGAGCTCTCTGAAGGGGAAAAGGAGAAAGGAGATCCCAACCAAATAGAACCTGTCAAGGAGCAAATGACCAGAATCAATTCTGATATGCATATATGGTCAGATGATGACAAGTCCAGACACTTATATATTATCTTAATCAGTATTCATGGGTTAGTACGTGGAGAAAACATGGAACTTGGAAGAGATTCAGATACAGGTGGTCAAGTGAAATATGTTGTAGAACTAGCGAGGGCTCTGGCAAATACGAAGGGAGTGTATCGGGTGGACCTCCTCACTAGACAAATTACCTCAACAGAGGTTGACTCAAGCTATGGTGAGCCCATTGAGATGTTGTCATGCCCTTCAGATGGTGGGGGCAGTTGTGGAGCATATATTATCCGGATCCCGTGTGGTCCTCGTGATAGGTACATACCAAAAGAGTCACTATGGCCATACATACCTGAATTTGTGGATGGGGCTCTAGGCCACATTGTCAACATGGCAAGAGCTTTGGGTGAACAAGTGGATGCAGGGAAGCCGATATGGCCTTATGTTATTCATGGTCACTATGCTGATGCTGGGGAGGTAGCAGCACACTTGTCCGGGGCCTTGAATGTGCCAATGGTGCTAACTGGACATTCACTGGGTAGGAACAAATTTGAGCAATTACTCAAACAAGGGAGGCTATCCAGGGAGGACATAAATTCAACTTACAAGATAATGAGGAGAATTGAGGCTGAGGAGCTGGGGTTGGATGCAGCTGAAATGGTGGTGACTAGCACAAGGCAAGAGATTGAAGAGCAATGGGGACTGTATGATGGGTTTGATCTCAAGTTGGAGAGGAAGCTTCGGGTTAGGAGACGTCGAGGAGTGAGTTGCTTTGGAAGGAACATGCCTAGGATGGTGGTTATTCCACCGGGGATGGACTTCAGCTATGTTAAAATCCAAGATTCAGAAGGTGACAGTGACCTCAAGTCCTTAATCGGCTCTGACAAAACTCAAAACAAAAGGCATCTACCTCCAATCTGGTCTGAGATTATGCGGTTTTTCACAAATCCACACAAGCCCATGATACTTGCACTGTCCCGGCCAGATCCTAAGAAAAATGTCACCACTCTGCTCAAGGCTTTTGGAGAGTGTCGACAGCTCCGAGAGCTAGCCAACTTGACTTTGATTCTAGGTAACAGAGATGACATAGAAGAAATGTCAAACAGCAGCTCAGTTGTTCTTACAACAGCGCTCAAGTTCATAGACAAGTATGACTTGTATGGTCAAGTGGCCTATCCCAAGCATCACAAACAGTCTGAAGTTCCTGAGATATATAGGTTGGCTGCTAAAACCAAGGGAGTTTTTATCAACCCTGCTCTTGTGGAGCCATTTGGTCTCACACTTATAGAGGCAGCTGCTTATGGTTTACCTGTTGTTGCTACAAAAAACGGTGGGCCTGTGGATATTATCAAGGCACTCAACAATGGCCTCCTTGTTGACCCACATGACCAGAAAGGCATAGCAGATGCCCTTCTAAAGCTCCTTGCTGATAAGAACTTATGGTTAGAGTGCCGTAAAAATGGGCTAAAGAACATCCACCGGTTTTCATGGCCGGAACACTGTCGTAACTACTTGTCCCATGTTGAGCATTGCCGGAACCGGCACCCCAACACCCATCTTGGGATCATACCTAGTATTGAAGAACCCATGAGCGACTCCCTAAGGGATTTAGAAGACCTTTCTCTAAAGTTTTCTGTTGATGGAGACTTCAAGCTTAATGGAGAGCTTGATGCAGCAACTAGACAGAAAGAACTCATTGAAGCTCTAACCCGCATGGCTTCCTCTAATGGAAATTCTAGTGTTAGCTATCATTCAGGAAGAAGGCAAGGGCTATTTGTAATAGCAGCAGATTGTTATGATAGCAATGGAGATTGCACTGAGAGATTACCAGCAATTATAAAAAATGTGATGAAATCTACAAGCTCTGGTTTAAACCTAATAGGATTTGTATTGTTGACTGGTTTGAGTTTACAGGAGATATTAGAGAAGTTAAGGTGTTGCCAAGTGAACTTAGAAGAAATTGATGCATTGGTTTGCAATAGTGGGAGTGAAATTTACTATCCATGGAGGGATTTGATAGCTGATTTGGAGTATGAAGCCCACGTGGAGTATCGGTGGCCTGGTGAGAATGTTAGATCAGTAGTGACGAGGCTTGCTCAGGGAGAAGGGGGGGCTGAGGATGACATTGTGGAGTATGCAGGTGTGTGTAGTACTAGGTGCTACTCTTATGGAGTGAAACCAGGAGCTAAGACTCGGAGAATTGATGACTTGCACCAAAGGATGCGGATGAGAGGCTTCCGTTGCAACCTTGTCTATACGCATGCTACATCAAGGTTGAATGTGGTACCCTTATTTGCATCAAGGGCCCAAGCACTAAGGTATCTTTCAGTTAGATGGGGAATTGACCTTTCTAAAATGGTGGTGTTTGTTGGGGAAAAAGGGGATACAGATTATGAAGACCTGCTTGTTGGCCTGCACAAGACCATCATTCTCAGAGGTTTAGTGGAGTATGGCAGTGAGAAGCTTCTTCGCAATGAAGAGAGTTTCAAAAGGGAGGACATGATCCCACAAGATAGTCCTAACATTGCCTTTGTGGAGGAGGGTTATGAGGCTCTTAATATCTCAGCAGCTCTACTGACTCTCGGGATCAAGTGA 3132 0.4508 MAGNEWINGYLEAILDAGSSRNGLRVVEDGDEKSNSKNNGSRRRRFVEGKVRIGRLEEKEKEKEEVFNPTKYFVEEVVNSFDESDLHRTWIKVIATRNSRDRSNRLENMCWRIWHLARKKKQIAWDDAQRLTKRRLEREQGRHDAADDLSELSEGEKEKGDPNQIEPVKEQMTRINSDMHIWSDDDKSRHLYIILISIHGLVRGENMELGRDSDTGGQVKYVVELARALANTKGVYRVDLLTRQITSTEVDSSYGEPIEMLSCPSDGGGSCGAYIIRIPCGPRDRYIPKESLWPYIPEFVDGALGHIVNMARALGEQVDAGKPIWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLSREDINSTYKIMRRIEAEELGLDAAEMVVTSTRQEIEEQWGLYDGFDLKLERKLRVRRRRGVSCFGRNMPRMVVIPPGMDFSYVKIQDSEGDSDLKSLIGSDKTQNKRHLPPIWSEIMRFFTNPHKPMILALSRPDPKKNVTTLLKAFGECRQLRELANLTLILGNRDDIEEMSNSSSVVLTTALKFIDKYDLYGQVAYPKHHKQSEVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAYGLPVVATKNGGPVDIIKALNNGLLVDPHDQKGIADALLKLLADKNLWLECRKNGLKNIHRFSWPEHCRNYLSHVEHCRNRHPNTHLGIIPSIEEPMSDSLRDLEDLSLKFSVDGDFKLNGELDAATRQKELIEALTRMASSNGNSSVSYHSGRRQGLFVIAADCYDSNGDCTERLPAIIKNVMKSTSSGLNLIGFVLLTGLSLQEILEKLRCCQVNLEEIDALVCNSGSEIYYPWRDLIADLEYEAHVEYRWPGENVRSVVTRLAQGEGGAEDDIVEYAGVCSTRCYSYGVKPGAKTRRIDDLHQRMRMRGFRCNLVYTHATSRLNVVPLFASRAQALRYLSVRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTIILRGLVEYGSEKLLRNEESFKREDMIPQDSPNIAFVEEGYEALNISAALLTLGIK* 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2034 1043 Gene3D Glycogen Phosphorylase B; 451 675 - -
Vvi18g2034 1043 Pfam Sucrose-6F-phosphate phosphohydrolase 806 989 IPR006380 -
Vvi18g2034 1043 Pfam Sucrose synthase 193 419 IPR000368 GO:0005985|GO:0016157
Vvi18g2034 1043 MobiDBLite consensus disorder prediction 136 167 - -
Vvi18g2034 1043 Gene3D Glycogen Phosphorylase B; 193 687 - -
Vvi18g2034 1043 CDD GT4_sucrose_synthase 192 685 - -
Vvi18g2034 1043 PANTHER SUCROSE-PHOSPHATE SYNTHASE 3-RELATED 1 1039 - -
Vvi18g2034 1043 NCBIfam sucrose-phosphate synthase 1 1039 IPR012819 GO:0005985|GO:0046524
Vvi18g2034 1043 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 207 688 - -
Vvi18g2034 1043 CDD HAD_SPS 770 993 IPR035659 -
Vvi18g2034 1043 MobiDBLite consensus disorder prediction 136 165 - -
Vvi18g2034 1043 Pfam Glycosyl transferases group 1 495 667 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2034 Vvi-Chr18 28209120 28216036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g2034 198 1043 Glycosyltransferase AT4G10120 75.736 0.0 1328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2034 K00696 - vvi:100232974 2048.09