Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2029 ATGTTTAAGAAATCGTTGGAGGCGAAGTCGCAGCAGCGGTTGTCCGGCGCAGACCGCAAAAAGCTGAAGCGAACAATCAAAGAGCGATTTCGTAACGCCTCCGATTCTGAAATCGATTCGATTCTTCCTCCTAAGGCTGAGATAACAATTGTGAAGTTACAAAATCGAGTTCATTTGTATGGTGTGGAAGGTGGTTTTCCTATGTTTTTTGACATTGATGGGCGAGGAACAGAAATATTCCCAACAGTTTATGCCCTCTGGAAGGTTCCTGATCTTTTGCCTGCTTTCATCCTGAAGGGGGGTGAGGTTTCTCGTTTTGTCATTGGAGGTGCTGATCTGATGTTCCCTGGTATTAGCATTCCTGCTGAAGGGCTACCTTCATTTGCAGAGGGGGAGCCTTGGGCAGTTAAAGTTCCAGGCAATCTGGCTCCAATTGCTGTTGGGACCACAACTATGAGTAGCACTGCAGCATTAAAAGCTGGTCTGCGTGGAAAAGCTTTGAGAATAACTCATTACTATCGAGATTCACTCTGGGAATTAGTTGAGGGCCATTATGTGCCAAATGCAGGATTTTTAGAAGATGTTGTGTTTGAAGATCCTTCTTTGTCATCAGCTTGTCAGGCTTCTGATTCATGCGAAGGTGTTAATGAGGCTTCAAGTGATCCACAAAACGACATTAGCAATAAAAAAGAGGGTGAATCTGTTGATGTCTTGGATCTAACTTCGGAAGCTAACCCATCTTCAACAGCACAGCTTGATGTTAGCAATGATCCTGCTGAACAAATAACTGCCAATGTGGATGATCTGAAGGTAACTGATGAGGAGTCAAATGTTGAGGTTCATCACACTCTATCCACTGAAGATGTGGATGCACTTTTAGACAAATGTCTGTTGCAAGCCTTGCATACAACGGTTAAAGATAAAGACCTTCCAATGCCTGGAAGCACATTGTGGGCAGGCCATGTATTACCTTGTAGGCCTTCAGGCATCACACTTGATATAAAAAAGTCATCCTACAAGAAATTATCAAAGTGGCTACAGGCTAAATCCTCCACAACATTGATTTCAGTAAAAGAGGATAAACATAAAAAAGAGGTGGTATTAAATTCTGTCAACCGCAATCATCCAGAGTACACATCTTTCAGGCCTGAGAAACGGCAAGTGGAAAAAAGTGATCAGACCAGTGACCATGCTGCTAGTGAAAGTCGATCACATAAAACACTTGAAGTGGCTGAGATATACAAACCGAGTGTGCATGTCAATCCTATTTTTGCTTCTGTGGGAGTCGATACGGGGAAACTGTTCAGTGCCTCTGAAGCCACCGATATTGTCTTCAGATATATTGAGAAAGAAAATCTGGTCAAACCAACAGACAAATCCATGGTGGTATTAGATGCAATATTATGCGATGCTTTGTTCAAAGGAGCTATTAAAAAGGGATCAACTTACCCAACTGCAATTCATAAGAAGGAGTTAGGACATACCTTCGTGAATCGCATGCAAGCTCATCATGTAGTGACAAGAGGAGGTGAGTCAGTTGTTCGCAAAGGTGCCCTTAAAAATATTCAGATAATGACAGAACGGAGGCAGGGTAACAAGAAGGTGACTAAAGTCTCAGGGTTTGAATCATTCTTGATGGATGCTGAAGCTTTGGCATCAGAGTTGCAGAAGAAATTTGCTTGCAGTACGACAGTGGCAGAACTGCCAGGTAAGAAAGGACATGAAGTTCTGGTTCAAGGAGGTGTGATTGAAGATCTGGCAAAACATCTAGTTGAACAATATGGAATCCCAAAGAGATGCATTGAAGTGCTTGATAAAACTAAGAAATGA 1830 0.4246 MFKKSLEAKSQQRLSGADRKKLKRTIKERFRNASDSEIDSILPPKAEITIVKLQNRVHLYGVEGGFPMFFDIDGRGTEIFPTVYALWKVPDLLPAFILKGGEVSRFVIGGADLMFPGISIPAEGLPSFAEGEPWAVKVPGNLAPIAVGTTTMSSTAALKAGLRGKALRITHYYRDSLWELVEGHYVPNAGFLEDVVFEDPSLSSACQASDSCEGVNEASSDPQNDISNKKEGESVDVLDLTSEANPSSTAQLDVSNDPAEQITANVDDLKVTDEESNVEVHHTLSTEDVDALLDKCLLQALHTTVKDKDLPMPGSTLWAGHVLPCRPSGITLDIKKSSYKKLSKWLQAKSSTTLISVKEDKHKKEVVLNSVNRNHPEYTSFRPEKRQVEKSDQTSDHAASESRSHKTLEVAEIYKPSVHVNPIFASVGVDTGKLFSASEATDIVFRYIEKENLVKPTDKSMVVLDAILCDALFKGAIKKGSTYPTAIHKKELGHTFVNRMQAHHVVTRGGESVVRKGALKNIQIMTERRQGNKKVTKVSGFESFLMDAEALASELQKKFACSTTVAELPGKKGHEVLVQGGVIEDLAKHLVEQYGIPKRCIEVLDKTKK* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2029 609 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2D 1 609 IPR039757 GO:0001731|GO:0003743
Vvi18g2029 609 MobiDBLite consensus disorder prediction 378 406 - -
Vvi18g2029 609 MobiDBLite consensus disorder prediction 208 223 - -
Vvi18g2029 609 FunFam Eukaryotic translation initiation factor 2D isoform A 1 185 - -
Vvi18g2029 609 Gene3D SWIB/MDM2 domain 402 506 IPR036885 -
Vvi18g2029 609 Gene3D - 1 186 - -
Vvi18g2029 609 ProSiteProfiles SWIB/MDM2 domain profile. 412 498 IPR003121 -
Vvi18g2029 609 Pfam Pre-PUA-like domain 2 90 IPR041366 -
Vvi18g2029 609 SUPERFAMILY PUA domain-like 103 179 IPR015947 -
Vvi18g2029 609 MobiDBLite consensus disorder prediction 208 231 - -
Vvi18g2029 609 ProSiteProfiles PUA domain profile. 93 174 - -
Vvi18g2029 609 SUPERFAMILY SWIB/MDM2 domain 404 506 IPR036885 -
Vvi18g2029 609 ProSiteProfiles Translation initiation factor SUI1 family profile. 522 594 IPR001950 GO:0003743|GO:0006413
Vvi18g2029 609 FunFam eukaryotic translation initiation factor 2D 519 603 - -
Vvi18g2029 609 SUPERFAMILY eIF1-like 493 605 IPR036877 GO:0003743|GO:0006413
Vvi18g2029 609 CDD PUA_eIF2d-like 92 174 - -
Vvi18g2029 609 MobiDBLite consensus disorder prediction 373 406 - -
Vvi18g2029 609 Pfam Translation initiation factor SUI1 520 597 IPR001950 GO:0003743|GO:0006413
Vvi18g2029 609 Gene3D - 518 604 - -
Vvi18g2029 609 CDD eIF2D_C 521 604 IPR039759 -
Vvi18g2029 609 CDD eIF2D_N 9 81 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2029 K15027 - vvi:100260152 1197.96