Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2000 ATGAGCTGGAGGCCTGGAAGTTTAAAAGAGGAAGACATGGAAGATCGCCATTCTGTCAGTAGTCCCAGAAGAATCCTTAGTCTGTCAAAACAGAGAAGGGCAACAGTGTCCTTCCCAGATCCAGATGACAAGTCTTCTGGGTTCGGTGTGGCTGGAGAGCATGGTCCCAAGCCTGCAGAAGTTTATGGATTTGTTGGGTCCATTTCAACTGTTGTTGCTACAGTTATTTTCCTGGTATGGGCATATGTTCCTGAGCACTGGTTACATTCTATTGGGATCTTTTACTATCCTAACAGGCAATGGGCTTTAGCTGTGCCGGCTTATGCTATGGTGACAGTAGTATTAGCATTGGGATTTTACATTGGCCTCAACTTCATGGCGACCCCTTCTCCAACTTCCTTAAACACGATGTTTGATGAATACAGTAGAGAACCTATGAGCTTTGAGCCTTCAATAGGAGATGAGCAGCCCATCGAACCCATGGCTGATATTGGCATCGATCGAATCAATGATCTAATGTTCAGTGATGTAAAATGA 537 0.4469 MSWRPGSLKEEDMEDRHSVSSPRRILSLSKQRRATVSFPDPDDKSSGFGVAGEHGPKPAEVYGFVGSISTVVATVIFLVWAYVPEHWLHSIGIFYYPNRQWALAVPAYAMVTVVLALGFYIGLNFMATPSPTSLNTMFDEYSREPMSFEPSIGDEQPIEPMADIGIDRINDLMFSDVK* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2000 178 MobiDBLite consensus disorder prediction 1 21 - -
Vvi18g2000 178 Pfam PIG-P 59 174 IPR013717 -
Vvi18g2000 178 MobiDBLite consensus disorder prediction 1 52 - -
Vvi18g2000 178 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P-RELATED 9 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2000 Vvi-Chr18 27675475 27677404 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2000 K03861 - vvi:100251682 366.311