Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1994 ATGGAGCAGTCTGAATCAACTGTAAACAACTGTCTGGTTTTTGCTGTTAATGGAAAGAGGTTTGAGGTCTCCACCATCCACCCTTCCACTACCGTGCTTGAGTTCTTGCGTTCTCACACTCCTTTCAAAGGTCCCAAGCTCAGCTGCGGTGAAGGTGGTTGTGGTGCTTGTGTTGTTCTACTGTCCAAGTATAACCCTGTGCATGACCAGGTGGATGATTGTACGGTGAGTTCATGTCTTACCCTGCTTTGTAGTGTAAATGGATGTTCAATTACAACAACTGAAGGCCTTGGGAACACGAAAGATGGATTCCACCCAATTCATGAAAGGTTCTCTGGATTCCATGCTTCTCAGTGTGGCTTTTGTACTCCTGGAATGTGCATGTCACTCTTCTCGGCTCTTGTCAATGCTGAGAAAACCCCCCGGCCAGAGCCCCCTAGGGGATTCTCCAAGCTGAAAGTTTCTGAAGCTGAAACGGCTATTGCAGGAAATCTCTGCCGCTGTACTGGATACCGGCCCATTGCTGATGCCTGTAAAAGTTTTGCAGCAGATGTTGATATGGAGGATTTGGGGTTTAATTCCTTTTGGAGAAAGGGAGATAGTAAAGAAGTGAAACTAAGCAGCTTACCCCTGTATAACCATAATGATGAGATCTGTACATTTCCTCAGTTCTTGAAAAATGAAACTAGGTCTACATTGCTTTTAGACTCTAGTAGATATTCCTGGTATAATCCTGTTACCATTGAGGAACTTCAAAGCTTATTGGGTTTTGTTGAGGATGGAAATGGGACTCGGGTTAAATTAGTGGTTGGTAACACTGGTATGGGTTATTACAAGGAAGTGGAAAGCTACGACAAATATATTGATCTAAGACATATCCCTGAATTCTCAACGATTAGAAGGGATAATACCGGGATAAGCATTGGAGCAACTATAACAATATCTAAAGCTATTGAAGCTCTAAGGGAATACAACCAAAGTGGATTTTACTCAGAAGGAGACATGGTCTATAAAAAAATTGCTGACCATATGGAAAAAGTTGCTTCAGGGTTCATCCGGAACTCAGCTAGTTTAGGTGGAAATCTGGTGATGGCACAAAGGAATCATTTCCCCTCCGACATTGCTACAGTACTTCTTGCAGTAGGTTCAACTGTAAATATAATGAATAGTCTCAAAAGCGAAGAGCTTACATTGGAGGAGTTCTTAAGAAGGCCAGAGTTAGATTCGAAAAGTATACTTGTAGGCGTCAAAATCCCAGATTGGGATCGGATTATGGGCATTTCTTCAGGGACCGAGATGAAGTTACTGTTTGAAACTTATCGAGCTGCACCACGGCCGTTAGGAAATGCATTGCCCTATTTAAATGCTGCTTTAATGGCTAAAGTTTCTCGCTGTACAACTTCTATTGGCATTATTGTAAGTAACTGTCAGTTTGCTTTTGGTGCTTATGGGACAAAACATCCAATAAGAGCGACAAAAGTTGAAGAATTTTTAACTGGAAAAGTGCTAAGTGTTGGTGTTCTATGTGAGGCTGTTAAATTACTTAGAGGCATTGTGGTACCTGATGATGGCACTTCAAGTCCAGCTTATAGGTCAAGCTTGGCTGTCAGTTTTCTTTTTGAGTTCTTTAGCCATTTGGTTGAGTCTAATGCTGAATCACCTGATGGCTGTGTGGATGGATATAGTACTTTGCTGTCTCCTGCAAAGCAGTTAGATCATGGTAAAATCTCAACCTTGCTATCTTCTGCAAAGCAGGAAGTGGAATTGAACAGACAGTATCGTCCAGTTGGTGAGCCAATTGCAAAGTCTGGGGCTGCCATCCAAGCTTCTGGGGAGGCTGTTTATGTGGATGACATTCCCTCTCCAACAAATTGCCTACATGGGGCTTTCATTTATGGTACAAAGCCTTTGGCTCGAGTAAAGGGTATCAAACTTAACCCCAAATCAGTGGCAGCTGGAGTCAGTGCACTTATTTCTTTTAAAGATATCCCAGGGGAGAACATAGGCTGTAAAACTATGTTTGGTACTGAACCTTTATTTGCAGATGATTTTACCCGATGTGCTGGAGAGTATATTGCTTTTGTGGTTGCAGACACACAGAAACATGCAAATATGGCTGCAAACCTTGCAGTGATCGATTATGACATGGAAAATCTGGAACCACCCATTTTATCGGTAGAAGAGGCTGTTAGGAGATCTAGCTTTTTTGAGGTTCCTTCCATCATTAGCCCAAAACAGGTTGGTGATTTCTCTAGAGGAATGGCTGAAGCAGATCACAAGATTCTCTCTGCTGAGATCAGACTTGGGTCACAGTATTATTTCTATATGGAGACACAAACTGCCCTTGCAGTTCCCGATGAAGACAACTGCATTGTGGTTTACAGTTCAATACAATGCCCTGAAAATGCACATACTACGATTTCGAGATGTCTTGGTATTCCTGAACACAATGTCCGTGTGATCACAAGAAGGGTTGGAGGTGGTTTTGGTGGAAAGGCCATGAAAGCAATTGCTGTAGCTACAGCATGTGCACTTGCAGCATACAAATTACAACGCCCTGTCCGGATATATATGAATCGCAAAACTGACATGAAAATAGCTGGAGGAAGACATCCAATGAAAGTAACCTACAGTGTAGGGTTCAAATCGAATGGAAAGATTACTGCCTTACACGTTGATATATTAATCAACGCAGGAATGGGTGTAGATATAAGCCCAGCTATGCCTATGCTCATGGTTGGTGCCCTTAAAAAATATGATTGGGGTGCTTTTTCTTTTGATATAAAGGTTTGCAAAACAAACCATTTGTCTAAATCAGCAATGCGTGCTCCTGGGGAGGTACAAGCTACATTTATATCTGAAGCTGTAATTGAACATGTCGCATCTACTCTTTCCATGGATGTGGACTCTGTGAGAAGCGGAAACCTCCACACTTTCAACAGCCTCAATTTTTTCTTTGAGGGCTGTGCTGGTGAACCTGTGGAGTACACTTTACCTTTAATCTGGGATAAGTTGGCTACTTCTTCAAGTTTTAAAGAAAGGACTGATATGGTAAAGCAGTTTAATATGTGCAATAAATGGCAGAAAAGGGGTATTTCTCGAGTACCAATTGTGCATGAAATTTCATTAAAAGCAACTCCAGGGAAAGTAAGCATTCTTAGCGATGGATCTGTTGCTGTGGAAGTTGGGGGGATTGAGTTGGGGCAGGGACTGTGGACAAAGGTGAAACAGATGACTGCATTTGCCCTCAGTTCAATTGGATGTGATGGAATGGGAGACTTCTTGGAGAAAGTAAGGGTCATACAATCAGATACCCTAAGTTTAATACAGGGGGGGTTGACTACTGCAAGCACTACATCAGAGTGCAGCTGTGAAGCTATTAGACTCTGCTGCAATATGTTGGTTAAAAGACTGACTCCTATCAAGGAGAGATTGCAGGAGCAAATGGGTTCTGTTGAATGGGGCACATTGATTCTTCAGGTGGAGGTAAATCTTCTCACTGGACAAACCACAATTTTGCAATCTGATATTATATATGACTGTGGTCAGAGTCTCAACCCTGCTGTGGATTTAGGACAGATAGAAGGAGCTTTTGTTCAAGGAATTGGGTTTTTTATGCTCGAGGAGTACACAACTAATTCAGATGGACTGGTGGTCACCGAAGGCACATGGACTTACAAGATCCCAACAATCGACACAATACCCAAGCAGTTCAATGTTGAGGTACTGAACAGCGGACATCATAAAAATCGTGTTCTTTCTTCTAAAGCTTCTGGTGAACCACCGTTACTCCTAGCTGTTTCAGTTCATTGTGCTACAAGGGCAGCTATTAGAGAAGCCCGGCAACAGCTTCTTTCCTGGACTGGGCTAACCAAGTGTGATTCAACATTCCAGTTGGAGGTCCCGGCAACAATGCCTGTTGTGAAGGAGCTCTGTGGACTGGAGAATGTGGAGAGTTACTTGCAAAGCTTGCTCTCTTAA 3981 0.426 MEQSESTVNNCLVFAVNGKRFEVSTIHPSTTVLEFLRSHTPFKGPKLSCGEGGCGACVVLLSKYNPVHDQVDDCTVSSCLTLLCSVNGCSITTTEGLGNTKDGFHPIHERFSGFHASQCGFCTPGMCMSLFSALVNAEKTPRPEPPRGFSKLKVSEAETAIAGNLCRCTGYRPIADACKSFAADVDMEDLGFNSFWRKGDSKEVKLSSLPLYNHNDEICTFPQFLKNETRSTLLLDSSRYSWYNPVTIEELQSLLGFVEDGNGTRVKLVVGNTGMGYYKEVESYDKYIDLRHIPEFSTIRRDNTGISIGATITISKAIEALREYNQSGFYSEGDMVYKKIADHMEKVASGFIRNSASLGGNLVMAQRNHFPSDIATVLLAVGSTVNIMNSLKSEELTLEEFLRRPELDSKSILVGVKIPDWDRIMGISSGTEMKLLFETYRAAPRPLGNALPYLNAALMAKVSRCTTSIGIIVSNCQFAFGAYGTKHPIRATKVEEFLTGKVLSVGVLCEAVKLLRGIVVPDDGTSSPAYRSSLAVSFLFEFFSHLVESNAESPDGCVDGYSTLLSPAKQLDHGKISTLLSSAKQEVELNRQYRPVGEPIAKSGAAIQASGEAVYVDDIPSPTNCLHGAFIYGTKPLARVKGIKLNPKSVAAGVSALISFKDIPGENIGCKTMFGTEPLFADDFTRCAGEYIAFVVADTQKHANMAANLAVIDYDMENLEPPILSVEEAVRRSSFFEVPSIISPKQVGDFSRGMAEADHKILSAEIRLGSQYYFYMETQTALAVPDEDNCIVVYSSIQCPENAHTTISRCLGIPEHNVRVITRRVGGGFGGKAMKAIAVATACALAAYKLQRPVRIYMNRKTDMKIAGGRHPMKVTYSVGFKSNGKITALHVDILINAGMGVDISPAMPMLMVGALKKYDWGAFSFDIKVCKTNHLSKSAMRAPGEVQATFISEAVIEHVASTLSMDVDSVRSGNLHTFNSLNFFFEGCAGEPVEYTLPLIWDKLATSSSFKERTDMVKQFNMCNKWQKRGISRVPIVHEISLKATPGKVSILSDGSVAVEVGGIELGQGLWTKVKQMTAFALSSIGCDGMGDFLEKVRVIQSDTLSLIQGGLTTASTTSECSCEAIRLCCNMLVKRLTPIKERLQEQMGSVEWGTLILQVEVNLLTGQTTILQSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLVVTEGTWTYKIPTIDTIPKQFNVEVLNSGHHKNRVLSSKASGEPPLLLAVSVHCATRAAIREARQQLLSWTGLTKCDSTFQLEVPATMPVVKELCGLENVESYLQSLLS* 1327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1994 1326 SUPERFAMILY FAD-binding/transporter-associated domain-like 203 421 IPR036318 GO:0050660
Vvi18g1994 1326 Pfam FAD binding domain in molybdopterin dehydrogenase 239 421 IPR002346 GO:0016491
Vvi18g1994 1326 SUPERFAMILY CO dehydrogenase ISP C-domain like 105 222 IPR036884 -
Vvi18g1994 1326 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 10 97 IPR001041 GO:0051536
Vvi18g1994 1326 Pfam CO dehydrogenase flavoprotein C-terminal domain 439 545 IPR005107 -
Vvi18g1994 1326 FunFam Aldehyde oxidase 99 233 - -
Vvi18g1994 1326 Pfam Molybdopterin cofactor-binding domain 1153 1235 IPR046867 -
Vvi18g1994 1326 Pfam Molybdopterin cofactor-binding domain 1005 1146 IPR046867 -
Vvi18g1994 1326 Pfam [2Fe-2S] binding domain 93 178 IPR002888 GO:0016491|GO:0046872
Vvi18g1994 1326 SUPERFAMILY CO dehydrogenase flavoprotein C-terminal domain-like 436 547 IPR036683 -
Vvi18g1994 1326 ProSiteProfiles PCMH-type FAD-binding domain profile. 235 423 IPR016166 GO:0071949
Vvi18g1994 1326 Pfam Molybdopterin cofactor-binding domain 745 976 IPR008274 GO:0016491
Vvi18g1994 1326 Gene3D - 208 293 IPR016167 -
Vvi18g1994 1326 FunFam Xanthine dehydrogenase oxidase 773 867 - -
Vvi18g1994 1326 FunFam Aldehyde oxidase1 433 549 - -
Vvi18g1994 1326 CDD fer2 12 92 IPR001041 GO:0051536
Vvi18g1994 1326 Gene3D Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 994 1322 - -
Vvi18g1994 1326 Gene3D Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 773 867 - -
Vvi18g1994 1326 Gene3D - 7 96 IPR012675 -
Vvi18g1994 1326 Gene3D - 434 550 - -
Vvi18g1994 1326 Gene3D - 294 420 IPR016169 -
Vvi18g1994 1326 PANTHER XANTHINE DEHYDROGENASE 11 1318 IPR016208 GO:0005506|GO:0016491
Vvi18g1994 1326 SMART Ald_Xan_dh_C_2 610 718 IPR000674 -
Vvi18g1994 1326 SUPERFAMILY CO dehydrogenase molybdoprotein N-domain-like 575 715 IPR036856 -
Vvi18g1994 1326 Gene3D Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead 578 717 - -
Vvi18g1994 1326 SMART CO_deh_flav_C_2 438 546 IPR005107 -
Vvi18g1994 1326 FunFam Xanthine dehydrogenase/oxidase 9 98 - -
Vvi18g1994 1326 Gene3D - 97 207 - -
Vvi18g1994 1326 Pfam 2Fe-2S iron-sulfur cluster binding domain 15 82 IPR001041 GO:0051536
Vvi18g1994 1326 Pfam Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 610 716 IPR000674 -
Vvi18g1994 1326 PIRSF Xanthine_dh 4 1160 IPR016208 GO:0005506|GO:0016491
Vvi18g1994 1326 PIRSF Xanthine_dh 1149 1325 IPR016208 GO:0005506|GO:0016491
Vvi18g1994 1326 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 49 57 IPR006058 GO:0051537
Vvi18g1994 1326 Gene3D Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 747 977 - -
Vvi18g1994 1326 Gene3D Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 1045 1153 - -
Vvi18g1994 1326 SUPERFAMILY Molybdenum cofactor-binding domain 721 1313 IPR037165 GO:0016491
Vvi18g1994 1326 SUPERFAMILY 2Fe-2S ferredoxin-like 13 98 IPR036010 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1994 Vvi-Chr18 27514537 27525639 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1994 K09842 - vvi:100267042 2608.56