Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1992 ATGAATGGATATAGTACTTTGCTGTCTCCTGCAAAGCAGTTAGATCATGGTAAAATCCCAACCTTGCCATCTTCTGCAAAGCAGGGAGTGGAATTGAATAGACAGTATCATCCAGTTGGTGATCCAATTGAAAAGTCTGGAGCTGCGATCCAAGCTTCTGGTGAGGCTGTTTATGTGGACGATATTCCCTCTCCAACTAATTGCCTTCATGGGGCTTTCATTTATAGTACGAAGCCTTTCGCTCAAGTAAAGGGTATCAAACTTAGGCCTAAATCAGTGGGGGATGGAGTCAGTGCACTTATTTCTTTTAAAGATATCCCAGGGGAGAACATAGGCACTAAGAATAGATTTGGTACTGAACCTTTTTATTTGCTGATGATTTCACTCGATGTTGCAGACACACAGAAACATGCAGATATGGCAGCAAACCTTGCAGTGGTTGATTATGACATGGAAAATCTGGAACCACCCATTTTATCTGTTGAAGAGGCTGTTAGGAAGTCAAGCTTTTTTGAGGTTCCTTCTATCCTTAAACCAAAACAGGTTGGTGATTTCTCGAAAGGAATGGCTGAAGCTGATCACAAGATTCTCTCTGCTGAAATCAAACTTGGGTCACAATATTACTTCTATATGGAGACCCAAACTGCCCTTGCAGTTCCAGATGAAGATAACTGCATTGTGGTTTACAGTGCAATACAATGCCCTGAATATGCACATGGTGCGATTGCAAGATGTCTTGGTATTCCTGAACATAATGTACGTGTGATCACAAGAAGGGTTGGAGGTGGTTTTGGTGGAAAGGCCATAAGAGCAATGCCTGTTGCTACAGCATGTGCACTTGCAGCATACAAATTACACCGCCCTGTCCGGATATATATGAATCACAAAACTGATATGATAATAGCAGGAGGAAGACATCCAATGAAAGTAACCTACAGTGTAGGATTCAAATCTGATGGCAAAATTACTGCCTTACACCTTGATATATTAATCAATGCTGGAATAGCTGTAGACGTAAGCCCAGTTATGCCTCAGCACATGCTGGGAGCCCTTAAAAATTATGATTGGGGTGCTTTATCTTTTGATATAAAGTTGTGCAAAACAAACCATTCGTCTAAATCAGCAATGCGTGCCCCTGGGGAGGCACAAGCTATATTTATTTCTGAAGCTGTAATTGAACACATTGCATCTACTCTTTCTGTGGATGTGGACTCTGTGAGAATCAAAAACCTCCACACTTTCAACAGCCTCATTTTTTTCTTTGAGGGCAGTGCAGGTGAACCTTTTGAGTACACTTTACCTTCAATCTGGGATAAGTTGGCTACATCTTCAAGCTTTAAAGAAAGGACTGAAAAGATAAAGCAGTTTAATATGTGCAATAAATGGCGGAAAAGGGGTATTTCTCGAGTACCAATTGTGCATGAAGTTTCATTAAGACCGACTCCAGGGAAAGTAAGCATTCTTAGTGATGGATCTGTTGCTGTTGAAGTTGGAGGCATTGAATTGGGCCAGGGGCTGTGGACAAAGGTGAAACAGATGGCTGCATTTGCTCTCAGTTCAATTCAGTGTGATGGAATGGGAGACTTCTTGGAGAAAGTAAGGGTCATACAATCAGATACCTTAAGCTTAATACAAGGAGGACTTACTGCTGGAAGCACGACATCAGAGTCCACATGTGAAGCTATTAGACTCTGCTGCAATATGTTGGTTGAAAGACTAATTCCTATCAAGGAAAAATTGCAGGAGCAAATGGGTTCTGTTAAATGGAGCACACTAATTCTTCAGGCACAAAGTCAAGCTGTGAACTTATCAGCAAGTTCTTACTATGTCCCTGACTTTTCTTCCATGCGATACCTAAACTATGGTGCTGCAGTGAGTGAGGTGGAAGTAAATCTTCTCACTGGAGAAACCACAATTTTGCAATCTGATATTATATATGACTGTGGGCAAAGCCTCAACCCTGCTGTGGATTTAGGACAGATAGAAGGAGCTTTTGTTCAAGGAATTGGGTTTTTTATGCTTGAGGAATACACAACTAATGCAGATGGACTGGTGGTCACTAAAGGCACATGGACATACAAGATCCCAACAGTTGACACCATACCCAAGCAGTTCAATGTTGAGATAATGAACAGCGGACAGCATAAAAAACGTGTTCTTTCTTCTAAAGCTTCTGGTGAACCACCATTACTTCTAGCAGTTTCAGTCCACTGTGCTACAAGGGCAGCTATTAGAGAAGCCCGACAACAGCTTCTTCGTTGGACAGGGCTAAACAAGTCCGATTCAACATTCCAATTGGAGGTCCCAGCAACAATGCCTGTTGTGAAGAAGCTCTGTGGATTGGACAATGTGGAGAATTATTTACAAAGCTTGCTTTCTTAA 2382 0.4173 MNGYSTLLSPAKQLDHGKIPTLPSSAKQGVELNRQYHPVGDPIEKSGAAIQASGEAVYVDDIPSPTNCLHGAFIYSTKPFAQVKGIKLRPKSVGDGVSALISFKDIPGENIGTKNRFGTEPFYLLMISLDVADTQKHADMAANLAVVDYDMENLEPPILSVEEAVRKSSFFEVPSILKPKQVGDFSKGMAEADHKILSAEIKLGSQYYFYMETQTALAVPDEDNCIVVYSAIQCPEYAHGAIARCLGIPEHNVRVITRRVGGGFGGKAIRAMPVATACALAAYKLHRPVRIYMNHKTDMIIAGGRHPMKVTYSVGFKSDGKITALHLDILINAGIAVDVSPVMPQHMLGALKNYDWGALSFDIKLCKTNHSSKSAMRAPGEAQAIFISEAVIEHIASTLSVDVDSVRIKNLHTFNSLIFFFEGSAGEPFEYTLPSIWDKLATSSSFKERTEKIKQFNMCNKWRKRGISRVPIVHEVSLRPTPGKVSILSDGSVAVEVGGIELGQGLWTKVKQMAAFALSSIQCDGMGDFLEKVRVIQSDTLSLIQGGLTAGSTTSESTCEAIRLCCNMLVERLIPIKEKLQEQMGSVKWSTLILQAQSQAVNLSASSYYVPDFSSMRYLNYGAAVSEVEVNLLTGETTILQSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNADGLVVTKGTWTYKIPTVDTIPKQFNVEIMNSGQHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARQQLLRWTGLNKSDSTFQLEVPATMPVVKKLCGLDNVENYLQSLLS* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1992 793 Gene3D Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 182 412 - -
Vvi18g1992 793 PANTHER XANTHINE DEHYDROGENASE 13 785 IPR016208 GO:0005506|GO:0016491
Vvi18g1992 793 SUPERFAMILY CO dehydrogenase molybdoprotein N-domain-like 30 153 IPR036856 -
Vvi18g1992 793 SMART Ald_Xan_dh_C_2 53 153 IPR000674 -
Vvi18g1992 793 Gene3D Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 443 771 - -
Vvi18g1992 793 SUPERFAMILY Molybdenum cofactor-binding domain 156 780 IPR037165 GO:0016491
Vvi18g1992 793 Pfam Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 53 151 IPR000674 -
Vvi18g1992 793 Pfam Molybdopterin cofactor-binding domain 180 411 IPR008274 GO:0016491
Vvi18g1992 793 Gene3D Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 480 616 - -
Vvi18g1992 793 Gene3D Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead 23 152 - -
Vvi18g1992 793 Gene3D Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 208 302 - -
Vvi18g1992 793 FunFam Xanthine dehydrogenase oxidase 208 302 - -
Vvi18g1992 793 Pfam Molybdopterin cofactor-binding domain 440 702 IPR046867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1992 Vvi-Chr18 27491474 27505772 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1992 K09842 - vvi:100265098 1390.17