Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1985 ATGGTTGAAAGTCACATGCAGAAACTGGTCCATATGGAGAATTTAGAACAGTCAGGGACTGAAGTTCTAATGAAGCCTCTGCCACAACTTAATGATGCCCAACCCTCTGAAGGAATGTCTATTGCTTTGCACAGTGCCGTGGCATGTATTGTTTCAGTCAGTCTTGACTACACTACTAGTCAATTTACGGATAGTAGGACTCCTACTTCACCAATGGAGACTGATGATGGGAATTCAAAGCAGGATGGAAATGCTGAAACCGATCAGTCGTGGGTTTACAGTTCCTTACCTAGCTATGGAAAACTAATGGACCATCTGGTGACATCATCCTCTATTTTATCTCTTTTTACAAAGCACTTGACTGCCCAACCCCTGATCATTGGTGATATTCCTTTTCCTCGAGATGCTGGGACATTTATAAAGGCCCTCCAGTCTATGGTGCTGAAGGTGGCATTGCCAGTATGGACAAATCCACAATTTGCTAATTGTAGTTATGATCTTAGCACAAAAATCATTTCTGTCATTTGGCTCATCTATTTTGGAGTCGAAGTGAAAAATGGAAAAAGCAATGCAGGCGCTCAATTAACTGAAACTCATGAAGATGATGAACTTGCTCGTGCACTTACCCTGCCACTTAGGAACTCTGAATTCGGTACAAAAGGAAAATTTGAGGGTGATGAAACTTACAGCTTTAATCAAGATGATCTGTTGGCTGAGGGTGTCTTGTTACTTGATACACATGCTGAAATTTTTGTTGGGGTTGGTAAGACTGCAGATCCCAAAGAAGAGCAGAATGCTTTTGAAATTGATACAATATTTGCTCCTCTCATAGGAACAAACAGTTTTCGGTGCAAACCAAGTGATCAAGATGATGCAGGCTGTAAGAATTGCCCAGAGGCATTGCAAATGGTCAGGCCAGATGATGAAGCTCTTCTCCAAAAGCTGAGGCAAATGCTATTGAACATGAGAAAATTATTATCCAAAAGTGGACAACCCGATCAACCCAGAGTCCCAATTTCCCAGCGTGTGCTGGGGTTGACAGTTGATGTGCAGTCATCTTATAGTGTATTCACGGGCACTATTCCTCAGACTTCCCAAGAAGAGGCTGTCCAGCAGTATACAGTGCCAACCTGGTTCCAAGTTGAACCAGACACCTTAGTGAGTAGACCAATTAATTGTGATGTCCCTCTATTTGGAGGTGTGCCTTTACAAACATCAGAACATCTGGTTCAGGAATCCCCAAGAGACTATTCTGGTAAAGTTCCTGGAAGATACTACAGAGTCTTGCATTCCATTTGA 1299 0.4242 MVESHMQKLVHMENLEQSGTEVLMKPLPQLNDAQPSEGMSIALHSAVACIVSVSLDYTTSQFTDSRTPTSPMETDDGNSKQDGNAETDQSWVYSSLPSYGKLMDHLVTSSSILSLFTKHLTAQPLIIGDIPFPRDAGTFIKALQSMVLKVALPVWTNPQFANCSYDLSTKIISVIWLIYFGVEVKNGKSNAGAQLTETHEDDELARALTLPLRNSEFGTKGKFEGDETYSFNQDDLLAEGVLLLDTHAEIFVGVGKTADPKEEQNAFEIDTIFAPLIGTNSFRCKPSDQDDAGCKNCPEALQMVRPDDEALLQKLRQMLLNMRKLLSKSGQPDQPRVPISQRVLGLTVDVQSSYSVFTGTIPQTSQEEAVQQYTVPTWFQVEPDTLVSRPINCDVPLFGGVPLQTSEHLVQESPRDYSGKVPGRYYRVLHSI* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1985 432 MobiDBLite consensus disorder prediction 61 87 - -
Vvi18g1985 432 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 227 275 IPR036180 -
Vvi18g1985 432 Gene3D Severin 215 339 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1985 Vvi-Chr18 27421750 27424327 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1985 - K10592 vvi:100255704 206.838