Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1981 ATGGCTTCTAAATTTGGAGATTCAATAATGCTTTATTTGGGTTTTCAGGTTGTTCTAGCACCATTAACCAGGCAGAGATCTTGGAACAATGTTCCCCAACCACCTGCTATCTTATATTACTCTCAAAGAACCAGCAAAGGGGGTCTTCTCATAGCTGAAGCAACGGGAGTTTCCGACACTGCTCAAGGGTATCCACATACACCGGGCATATGGACAAAAGAACAAGTTGAAGCATGGAAACCTATTGTAGATGATGTACATGCTAAAGGCGGTATCTTTTTTTGTCAGATTTGGCATGTGGGGAGGGTTTCAAACACGGGTTTCCAGCCAAACGGGCAAGCTCCAATCTCTTGTACAGACAAGCCATTGACACCCCAAATCGGAGCCAATGGCATTGATGTTGACCAGTTCTCACCTCCCCGGCGGCTAACAACAGATGAAATCCCTCAAGTTGTAAAGGATTTTAGACTTGCTGCAAGGAACGCTATTGAAGCTGGTATGTGA 504 0.4484 MASKFGDSIMLYLGFQVVLAPLTRQRSWNNVPQPPAILYYSQRTSKGGLLIAEATGVSDTAQGYPHTPGIWTKEQVEAWKPIVDDVHAKGGIFFCQIWHVGRVSNTGFQPNGQAPISCTDKPLTPQIGANGIDVDQFSPPRRLTTDEIPQVVKDFRLAARNAIEAGM* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1981 167 Gene3D Aldolase class I 14 167 IPR013785 -
Vvi18g1981 167 SUPERFAMILY FMN-linked oxidoreductases 16 167 - -
Vvi18g1981 167 Pfam NADH:flavin oxidoreductase / NADH oxidase family 16 166 IPR001155 GO:0010181|GO:0016491
Vvi18g1981 167 PANTHER NADH OXIDOREDUCTASE-RELATED 13 167 IPR045247 GO:0010181|GO:0016491
Vvi18g1981 167 FunFam - 2 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1981 Vvi-Chr18 27386340 27387315 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1981 13 167 Acyl Lipid Metabolism Gene Families AT1G76690 78.710 4.97e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1981 K05894 - vvi:100255087 317.775