Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1965 ATGGGCTTTTTATGTTCTGCTTGTTCTTGGGATATTCGTGTTGCTCTAATATGGGTTTGGAGTGTGATTTATGTGGCAAATGCTTCTGAGAAGTACATTTCTGCAGTAGGAGACCCGGGAATGAAGAGTCCAAATGTGAGAATTGGGCTGGAAGCTTGGAACTTCTGCAATGAAGTTGGGGCTGAAGCACCTCAAATGGGGAGTCCTAGAATGGCTGATTGTGCTGATTTGTACTGTCCATTGATTTCAGATTCGGTGGATGGTTTTTTGCATGATAATGGGAGCAAGTGTGAAGCACATCATAAAGTGGAGAAATCAGACAACCATTTGGGTGCTGGTGATGTATTCCCTGTTGAGGGTTTTTATTCTCATACAGACCCTGACCTGTTTGCTGTGGAAAAGGAACTGTATCTTGGTTCTCTGTGTGAGGTGCATGATTCTAATTCTGCAGAACCATGGCAGTTTTGGATGATCATGCTCAAGAATGGCAACTTCGACAAAAACACAACACTTTGCCCTGAAAATGGCAAGAAAGTTAGTAAAATAGTTACAAAGAGAACATTTCCATGTTTTGGTGAAGGATGTATGAATCAACCACTTGTGTACCATAACTACTCCAGAGTGGTTTCTTCTGGGGACGAAAATGTGTCTTTAACTGGAGAATTTTATGGGACCTATGACCTTGATGCCGATTTGAGCAAAGGTCCAGGGAAGAACTCTTACTTCTCGGTCTCATGGATGAAGAATATGAGCTCAGGGAGTTGGATTTTCTCACAAAAGTTGACAACATCTGCAAAGTATCCTTGGCTTATGTTGTATCTCCGTTCAGATGCAACTAAAGGATTCAATGGTGGTTATCACTATAATGGCCGTGGCATCATGAATAAGTTGCCAGAATCTCCAAACTTTACTGTGAAACTGACGCTTGATATTAAACGTGGAGGAGGCACCAACAGTCAATTTTATCTCCTTGATATAGGAAGTTGTTGGAAGAACAATGGAGATCCATGTGATGGTGATGTTCTGACAGATGTGACCAGATATAGTGAGATGATCATAAATCCGGCAACTACCAACTGGTGCCGCCCAAATAACCTCATTTCTTGCCCACCTTATCATGTTAGTGCTGATGGTGAAATAATATATAGAAATGATACATCCCGGTTTCCATATTCTGCCTATCATCTATACTGTGGGCCAGGGAATGCTGACTATTTGGAGAAACCCTTTGATATCTGTGACCCATATAGTAATCCACAATCACAGGAATTGGTTCAAATTCTTCCACATCCTGAGTGGGCTGTGCACGGTTATCCTGCAAAGAAAGGAGATGGATGGATTGGGGATTCCAGGACATGGGAGCTTGAAGTGGGAGCGCTCTCTAGTCGATTGTATTTCTACCAGGATCCAGGAACCAAACCCGCGAAGCGGGTGTGGACTTCCATCAATGTTGGTACTGAAATATATGTTAGCAGCAAAGGGGAGACTGCAGAATGGACTGTAAGTGATTTTGATGTATTGGTTCCTGAAGATACTACTGATGATGGTGAAGGCTTTTTTTAG 1563 0.4242 MGFLCSACSWDIRVALIWVWSVIYVANASEKYISAVGDPGMKSPNVRIGLEAWNFCNEVGAEAPQMGSPRMADCADLYCPLISDSVDGFLHDNGSKCEAHHKVEKSDNHLGAGDVFPVEGFYSHTDPDLFAVEKELYLGSLCEVHDSNSAEPWQFWMIMLKNGNFDKNTTLCPENGKKVSKIVTKRTFPCFGEGCMNQPLVYHNYSRVVSSGDENVSLTGEFYGTYDLDADLSKGPGKNSYFSVSWMKNMSSGSWIFSQKLTTSAKYPWLMLYLRSDATKGFNGGYHYNGRGIMNKLPESPNFTVKLTLDIKRGGGTNSQFYLLDIGSCWKNNGDPCDGDVLTDVTRYSEMIINPATTNWCRPNNLISCPPYHVSADGEIIYRNDTSRFPYSAYHLYCGPGNADYLEKPFDICDPYSNPQSQELVQILPHPEWAVHGYPAKKGDGWIGDSRTWELEVGALSSRLYFYQDPGTKPAKRVWTSINVGTEIYVSSKGETAEWTVSDFDVLVPEDTTDDGEGFF* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1965 520 PANTHER - 15 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1965 Vvi-Chr18 27237245 27242850 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1965 - - vvi:100265490 1110.9