Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1945 ATGGGTAACAAGTTCATTTGCATGACAAAGAAAGATGGAAGGGAGAATGGGTCAAAGAGCAAGAGGGTTGGGAGGTCTCAGAGGAAAATGCTGGATGAGGACGAGTTCTTGCACAGGCAAGCTTTGTCAATGGCAATTCAGCAGCACCAGTTGTCCCAGAGGTTTGACGGGTCCATGTCTAGGCGAATTGGGTCGACTAGCTCGCGGCGCCACACCCTCTCCGATCCGTTTTCTAATGGAAAACAGGGACCAGATATTTTGGAGAATGTTAAAACAAAAAAATTTGTTCTGGTACATGGAGAAGGATTTGGAGCATGGTCTTGGTATAAAACTATTGCTCTGTTAGAGGAAGTGGGTTTGGTTCCAACTGCCTTAGATCTTAGGGGATCTGGTATTGATCAGACAGACACAAATAGTGTCACTACATTGGCAGACTATTCAAAACCACTCACTGATTATCTAGAAAACCTTCCAGAGGATGAAAAGGTTATTTTGGTTGGTCACAGTAGTGGAGGCGCATCTGTTTCATATGCTTTGGAGCATTTCTCACAGAAGATCTCAAAAGCAGTTTTTCTTTGTGCTACAATGGTGTCTGATGGGCAGAGGCCTTTTGATGTGTTTGCTGAAGAGCTTGGGTCTTCGGAACTTTTCTTGAAGGAATCAGAGTTTTTAATTTATGGGAATGGCAAAGATGAGCCTCCTACTGCATTCATGTTTGGGAACTTGCAACTTAAGGGGTTATATTTCAACCAAACCCCAACAAAGGATGTTGCTCTGGCAACAGTTTCCATGAGACCCATCCCTCTGGGGCCTATCATGGAGAAGCTGTCCCTTTCCCCTGAAAACTATGGAAAAGGCCGCCGGTTCTTCATCCAGACGCTGGACGATCGTGCACTTTCACCAGATGTCCAAGAAAAGCTAGTGAGGGAGAACCCACCTGAAGGAGTCTTCAAGATCAAAGGTAGTGATCACTGCCCATTCTTCTCAAAGCCACAGTCCCTGCACAAAATTTTACTTGAAATTGCTCAAATCCCATAA 1038 0.448 MGNKFICMTKKDGRENGSKSKRVGRSQRKMLDEDEFLHRQALSMAIQQHQLSQRFDGSMSRRIGSTSSRRHTLSDPFSNGKQGPDILENVKTKKFVLVHGEGFGAWSWYKTIALLEEVGLVPTALDLRGSGIDQTDTNSVTTLADYSKPLTDYLENLPEDEKVILVGHSSGGASVSYALEHFSQKISKAVFLCATMVSDGQRPFDVFAEELGSSELFLKESEFLIYGNGKDEPPTAFMFGNLQLKGLYFNQTPTKDVALATVSMRPIPLGPIMEKLSLSPENYGKGRRFFIQTLDDRALSPDVQEKLVRENPPEGVFKIKGSDHCPFFSKPQSLHKILLEIAQIP* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1945 345 Gene3D alpha/beta hydrolase 87 343 IPR029058 -
Vvi18g1945 345 SUPERFAMILY alpha/beta-Hydrolases 94 341 IPR029058 -
Vvi18g1945 345 FunFam putative methylesterase 11, chloroplastic 89 344 - -
Vvi18g1945 345 MobiDBLite consensus disorder prediction 1 27 - -
Vvi18g1945 345 Pfam Alpha/beta hydrolase family 95 332 IPR000073 -
Vvi18g1945 345 MobiDBLite consensus disorder prediction 55 79 - -
Vvi18g1945 345 MobiDBLite consensus disorder prediction 8 27 - -
Vvi18g1945 345 MobiDBLite consensus disorder prediction 55 84 - -
Vvi18g1945 345 PANTHER METHYLESTERASE FAMILY MEMBER 92 342 IPR045889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1945 Vvi-Chr18 26815016 26823594 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1945 33 166 Miscellaneous Gene Families AT3G29770 40.909 1.97e-24 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1945 - - vvi:100241390 692.189