Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1944 ATGATGGCCAAAGAACCAGGGAGCAAGTGCAAAAGTTTATTGAGATCTGTAGAAGAGAGGGCATTGTCCAAAAAGGTGGAGGAAAAGCAAGTACCCTATCTTCCTAAAGATTGTTTTTCTAACATCCTTGTTCGGCTTCCTATTGAATCTCTACCAAGTTCAAGGTTGGTTTGTAAGCCATGGTATAAATTGATTAATAGCCCCATTTTCATTGATGCCCATCTCCGTCGCTCTGAAGTTGTTCTAATCTTTTTAACACCAATTGTGAAACAAGAAACATACTTATACCCTTTTTCTACGAGATCAATCTCACAAGAGAAACCAAACACTTTCTCTGTTGAAGTAAACCTTCTTCAATTGGAATCCACCCCTCTTTTTCATCAACCAGTCATAGACCCCAGAAGAAAGTCCTATATCCAGTTCATGGAGATTAAAGATGGAAAGAGCAAGATTGGAGAGTTTAACATAAGCTGCATGGGCGAGATTACAGCCAGTTTCAATGGTCTGATTTTGCTTGAAAACAAGCTGAAGAGAGGAAGATTGGTAGTCATGAATCCTGTTACTCGGAAACTCACTGAACTTCCTCTAGGAACTTTATCTCAACCCCATCAAGAATCTTATGGCTTTGCATTAAGCTATTCTACAAGCGAATACAAAGTGGTACACTTGTTTCATGATGAGTTGAGGTACATCAATTGTGAGATACTGAATGTTGGGACAAGAACTTGGAGACCAGTGAATGGACCTTCTTTTGGGCTCATTAGTTGGTTCGGGTACAAACCGGTTTCTGCCATGGGAGCTCTGCACTGGGTTCCTCACATCAACGACAATGATTACATAGTGTCTCTGCACTTGGAAAATGAAAAGTTCCACACTGTCCAGCTCCCAAAGAGTTACAGAACTCATGATGGAATCGTTGAGATGGGGGGCAGCCTATGTTTTGTGTCTCATGATGAAGAAATGCTCCAAATCGGCATCTGGAGCTTGAAGGGTTTGTCTGGGGAAGGTTGGACAAAGCAGCACTGCATCACAACTGGCTGCATACTGGACATGGTTCCTCTGTTCAGTATGCGAACGACTGAAGAAATGGTGTTCAAGAGGGATGAAGATGGGTCCTTGTATGCCTATGATTTCCAACTCCAGGTGATGAGAAAGATTGACATGGAAACCCCATTATCTGACTGCTACCTGCCTCATGTGAATAGCCTTGTTTCATGGTGTCCCAAGGATTCGAGTGAAGATGGGAATTATTGA 1254 0.4226 MMAKEPGSKCKSLLRSVEERALSKKVEEKQVPYLPKDCFSNILVRLPIESLPSSRLVCKPWYKLINSPIFIDAHLRRSEVVLIFLTPIVKQETYLYPFSTRSISQEKPNTFSVEVNLLQLESTPLFHQPVIDPRRKSYIQFMEIKDGKSKIGEFNISCMGEITASFNGLILLENKLKRGRLVVMNPVTRKLTELPLGTLSQPHQESYGFALSYSTSEYKVVHLFHDELRYINCEILNVGTRTWRPVNGPSFGLISWFGYKPVSAMGALHWVPHINDNDYIVSLHLENEKFHTVQLPKSYRTHDGIVEMGGSLCFVSHDEEMLQIGIWSLKGLSGEGWTKQHCITTGCILDMVPLFSMRTTEEMVFKRDEDGSLYAYDFQLQVMRKIDMETPLSDCYLPHVNSLVSWCPKDSSEDGNY* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1944 417 Gene3D - 27 82 - -
Vvi18g1944 417 PANTHER BNACNNG10540D PROTEIN 8 341 - -
Vvi18g1944 417 ProSiteProfiles F-box domain profile. 28 78 IPR001810 GO:0005515
Vvi18g1944 417 SUPERFAMILY F-box domain 32 98 IPR036047 GO:0005515
Vvi18g1944 417 Pfam F-box domain 34 68 IPR001810 GO:0005515
Vvi18g1944 417 NCBIfam F-box protein interaction domain 165 376 IPR017451 -
Vvi18g1944 417 Pfam F-box associated domain 266 351 IPR013187 -
Vvi18g1944 417 SMART fbox_2 34 73 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1944 - - vvi:100263649 857.055