Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1915 ATGGAGATTGGATTTGGAATTTGGAAAAATGGTATTTCAGTCCGAGAACAATGTATTAAATGGTTGTTGAAAGACAGACATTTGCTTATCTCAAAAATCAGGAAGGAATACCCTGATAGAATGATGCTCACATTCACTGTGTTCTCATCTCCAAAGGTCTCTGACACAGTCCTCTGTATGATATTTCTAACCACTCCTAGTTTTGGTGATCCGAACCATTTGATTTCTGCAACCATGAGTAGGGTTACTTGCTGCCTCGGGTTCCCAGGTCAGCTCAATTCCGACCTCCGGAAACCTGCGGTGAACCCCATTCCTTTCCCCCCTCTACACTTCTTCATGGTTGGGCTTGCTCGTCTCGTCTCTCGTGGGTCTCAACAGTACCATGCACTAACAGTCCCCGCGCTCAGCCAGCAGATGTGGGATGCCAAGAACATGATGTGTGCTGCAGACCCACGACATGGCCGCTACCTCACTGCCTCAGCTATGTTTAAGGGCAAGATGAGCACCAAAGAAGTGGAGGAACAAATGATTAATGCCCAAAACAAGAACTCTCCTTACTTTGTGGAATGGATTCCAAACAATGAAAATCAAACAGTCTCTGGAAATGAAGGAACCGGTACGGCGGGCACGGCTGGACCAAGAAAGGGCAGTTTTGAAAGAAAAAAAAAAGATTTATGGTGTTCCTGGAACTAA 693 0.4574 MEIGFGIWKNGISVREQCIKWLLKDRHLLISKIRKEYPDRMMLTFTVFSSPKVSDTVLCMIFLTTPSFGDPNHLISATMSRVTCCLGFPGQLNSDLRKPAVNPIPFPPLHFFMVGLARLVSRGSQQYHALTVPALSQQMWDAKNMMCAADPRHGRYLTASAMFKGKMSTKEVEEQMINAQNKNSPYFVEWIPNNENQTVSGNEGTGTAGTAGPRKGSFERKKKDLWCSWN* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1915 230 SUPERFAMILY Tubulin C-terminal domain-like 90 200 IPR008280 -
Vvi18g1915 230 Gene3D - 109 209 IPR037103 -
Vvi18g1915 230 SMART Tubulin_C_4 92 219 IPR018316 -
Vvi18g1915 230 MobiDBLite consensus disorder prediction 215 230 - -
Vvi18g1915 230 Pfam Tubulin C-terminal domain 107 199 IPR018316 -
Vvi18g1915 230 SUPERFAMILY Tubulin nucleotide-binding domain-like 28 89 IPR036525 -
Vvi18g1915 230 PANTHER TUBULIN 27 58 IPR000217 GO:0005874|GO:0007017
Vvi18g1915 230 Gene3D Tubulin/FtsZ, GTPase domain 26 108 IPR036525 -
Vvi18g1915 230 MobiDBLite consensus disorder prediction 196 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1915 Vvi-Chr18 26391778 26396402 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1915 K07375 - aof:109840908 283.493