Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1903 ATGGAGTGCAGGGAAGAAATGGAACAAATAGTCTTGCCGGTGTTCTACCACGTGGATCCTTCTGATGTGCGAAAGCAAACAGGGAGCTTCGGAGAGGCATTTTCCATTCATGAAAGAAATGTGGATGAGAAAAAGGTGCAGAGGTGGAGGGTTTTCTTAACTGAAGCAAGCAATCTAAGTGGTTTCCATGTGAATGATGGGTAA 204 0.4461 MECREEMEQIVLPVFYHVDPSDVRKQTGSFGEAFSIHERNVDEKKVQRWRVFLTEASNLSGFHVNDG* 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1903 67 ProSiteProfiles TIR domain profile. 1 67 IPR000157 GO:0007165
Vvi18g1903 67 PANTHER TMV RESISTANCE PROTEIN N-LIKE 1 66 - -
Vvi18g1903 67 SUPERFAMILY Toll/Interleukin receptor TIR domain 1 62 IPR035897 -
Vvi18g1903 67 Gene3D - 1 67 IPR035897 -
Vvi18g1903 67 Pfam TIR domain 1 56 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1903 Vvi-Chr18 26165624 26165827 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1903 1 65 Miscellaneous Gene Families AT1G57670 33.846 1.56e-08 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1903 - - vvi:100263700 141.739