Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1898 ATGGATAGCCTAACCCTAGTTTCTTCCCCAAAACTGGTATTGGGTCACTCTCCAAGCAACCCTAGACACATCTCATGCGCACACTCTTCCTTTTCCCTCCCCCTTCTCTTCAGGAAACCCAGAAAATTTATTGCTGCTTCCCAATCTGGAGCCTCCCCAAGAACCCCCAGACATGTAGTAGAGACGAAGCTAGGGACAGAATGTTTTGCAAGCATTTCTTCAAGTAGCCAAGGAACTTCTTCGGTTGGTGTTAACCCACAATTTTCACCACCGCCCCCATCGTCAAACATAGGGTCACCTCTCTTTTGGATTGGAGTTGGTGTTGGGCTCTCGGCACTCTTTTCATGGGTGGCCTCAAACTTAAAGAAATATGCAATGCAACAAGCTTTCAAGACTTTGATGGGCCAGATGGATTCACAAAATAACCAATTCAATACTACTACTTTTTCACCAGGATCGCCTTTTCCATTTCCAATGCCCCCACCATCAGGGCCGAGCACCTCACATTCAGGGCCAACAACCTCACCATCAGGGCCAACTACCTCACCTTCTACAGTTGCAGCTCAATCCATGGTTACTGTAGATGTACCTGCAACCAAAGTAGAGACGCCACCAGCTACAGATGTCAAAGATGACATTGAAAAGAAGAATGAACAAAACAAATATGCTTTTGTAGATGTTTCTCCAGAAGAAACGCTGCAAGAGAGTCCTTTTGAAAATTTTGAAGAATCAACTGAGACAAGTTCATCCAAGGATGCACAGTTTTCCGCAGGAGTTTCTCAAAATGGAACTCCTCCCAGGCCAGGCATGGGCGTTTCTGAGGATTCTCAATCTACTCGAAACGCAAATCCTTTCTTGTCGGTGGATGCTCTGGAGAAAATGATGGAAGATCCAACAGTGCAAAAGATGGTTTATCCCTATTTACCTGAGGAGATGAGGAACCCCACTACCTTCAAATGGATGCTACAAAATCCACAATATCGTCAACAGCTGCAGGACATGCTAAATAACATGGGGGGAGGTGCTGAATGGGACAATCGAATGATGGATAACCTGAAAAATTTTGATCTCAGCAGTCCCGAGGTCAAGCAGCAATTTGATCAAATTGGGCTTACACCTGAAGAAGTTATTTCAAAAATTATGGCCAATCCTGATGTTGCCCTGGCATTTCAAAATCCAAGAATTCAAGCAGCCATCATGGATTGTTCTCAGAACCCTCTGAGTATTGCAAAGTATCAAAATGACAAGGAGGTTATGGATGTTTTCAACAAAATATCGGAACTCTTCCCCGGAGTATCAGGTCCACCTTGA 1311 0.4455 MDSLTLVSSPKLVLGHSPSNPRHISCAHSSFSLPLLFRKPRKFIAASQSGASPRTPRHVVETKLGTECFASISSSSQGTSSVGVNPQFSPPPPSSNIGSPLFWIGVGVGLSALFSWVASNLKKYAMQQAFKTLMGQMDSQNNQFNTTTFSPGSPFPFPMPPPSGPSTSHSGPTTSPSGPTTSPSTVAAQSMVTVDVPATKVETPPATDVKDDIEKKNEQNKYAFVDVSPEETLQESPFENFEESTETSSSKDAQFSAGVSQNGTPPRPGMGVSEDSQSTRNANPFLSVDALEKMMEDPTVQKMVYPYLPEEMRNPTTFKWMLQNPQYRQQLQDMLNNMGGGAEWDNRMMDNLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPDVALAFQNPRIQAAIMDCSQNPLSIAKYQNDKEVMDVFNKISELFPGVSGPP* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1898 436 MobiDBLite consensus disorder prediction 141 280 - -
Vvi18g1898 436 SMART CBM 373 412 IPR006636 -
Vvi18g1898 436 SMART CBM 297 331 IPR006636 -
Vvi18g1898 436 Gene3D - 373 434 - -
Vvi18g1898 436 PANTHER PROTEIN TIC 40, CHLOROPLASTIC 1 435 - -
Vvi18g1898 436 MobiDBLite consensus disorder prediction 153 167 - -
Vvi18g1898 436 MobiDBLite consensus disorder prediction 233 280 - -
Vvi18g1898 436 Pfam STI1 domain 374 425 IPR041243 -
Vvi18g1898 436 FunFam Protein TIC 40, chloroplastic 373 434 - -
Vvi18g1898 436 MobiDBLite consensus disorder prediction 205 221 - -
Vvi18g1898 436 MobiDBLite consensus disorder prediction 168 192 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1898 - - vvi:100265473 762.681