Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1890 ATGGCATTTGGACACAAGTACGTAATGTTAATGCATGTTACCACAAAGAAGGTGAGGAGGCTTGGGAAAAGAGGGATACTTAACTCATGGAGAAGATTGGTGATCCATAGGAGCACAAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGCAAATGGCTTGCTTTGCAAATCTACCAATGATTTCAAGCCCAAACCCCAACCCTAATCCTAATCTTAAAGCCTCTGCTTCTCTCTCTCAATCATCAATCTCCACCAAGCTTCATTTTTCTTCACAATTCTCATCTCTCTCCCCTTCTCCCCTCTCGCTTCGCTGCAATCAAACCCTAATACTACGTCGTTTCGGAGGCCGCGCTCCCAGCGTATCTCCAACTCTCGTGGTAGTGGCATCTGCTAATCCCAATTCTCTGAAGATTATGATATCCGGTGCTCCTGCTTCTGGTAAAGGGACACAATGCGAGCTCATCACTAAAAAGCATGATTTGGTGCATATTGCTGCTGGAGATTTATTGAGGGCAGAAGTTGCAGCTGGTAGTGAAAATGGGAGGCGAGCGAAGGAGTTCATGGAAAAAGGGAAGCTAGTGCCAAATGAAATAGTTGTCATGATGGTTAGGGACCGTCTATTGCAGCCTGATTCTCAAGAAAAGGGATGGCTTTTAGATGGATACCCTAGGAGCCAATCTCAAGCTACTGCTCTCAAGGAATTTGGGTTTGAGCCTGACCTTTTCATTCTCCTAGAAGTCCCTGAAGAAATTCTGGTCGAAAGAGTGGTTGGAAGGAGGCTAGATCCTGTCACTGGGAGGATATACCACTTGAAGTATTCTCCCCCTGAGAATGAAGAAATTGCTGCTAGGCTTACTCAACGCTTTGATGATACTGAGGAAAAGGTAAAGTTACGATTGCGTACTCATCATCAAAATGTGGAGGCAGTACTTTCATTGTACAAAGACATAACAATCAAGGGAACCATGTTCATGCAATCCATTGATGCTTCTTCAATGATTAAGACGGGAGAAAAGATGTTTGAGTTACTTGACAAATGGGTAGAGCAAGTTGGTGAAGAGAATGTTATTCAAGTTATAACAGATAATCACTCAAGTTATGTGATGGCAGGGAGGTTGTTAGAATTAAAGCGTCCACATTTGTATTGGACACCATGTGCTGCACATTGCCTTGACTTGATGTTGGAAGATATTGGAAAGCTACCAAACATCAAGAGGACATTGGAGAGGGCTATATCACTAAATGGGTATATTTATAATCGCTCAGGGCTACTCAACATGATGAGGCGGTTTACTGGACAAAGGGAATTGCTTAGGCCTGCTAAGACTCGGTTTGCAACTGTCAATGGAGGTGTTTCAAAAGAAGAAGTGTTTGCCCAAATTGACAGTGCTCTGGAAAAACTTGTCAAGCAAAAGAAGGCTACTGCAGGACCTGTAGCAATATAG 1443 0.4359 MAFGHKYVMLMHVTTKKVRRLGKRGILNSWRRLVIHRSTRERERERGREQMACFANLPMISSPNPNPNPNLKASASLSQSSISTKLHFSSQFSSLSPSPLSLRCNQTLILRRFGGRAPSVSPTLVVVASANPNSLKIMISGAPASGKGTQCELITKKHDLVHIAAGDLLRAEVAAGSENGRRAKEFMEKGKLVPNEIVVMMVRDRLLQPDSQEKGWLLDGYPRSQSQATALKEFGFEPDLFILLEVPEEILVERVVGRRLDPVTGRIYHLKYSPPENEEIAARLTQRFDDTEEKVKLRLRTHHQNVEAVLSLYKDITIKGTMFMQSIDASSMIKTGEKMFELLDKWVEQVGEENVIQVITDNHSSYVMAGRLLELKRPHLYWTPCAAHCLDLMLEDIGKLPNIKRTLERAISLNGYIYNRSGLLNMMRRFTGQRELLRPAKTRFATVNGGVSKEEVFAQIDSALEKLVKQKKATAGPVAI* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1890 480 Gene3D - 132 357 IPR027417 -
Vvi18g1890 480 PRINTS Adenylate kinase signature 287 302 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi18g1890 480 PRINTS Adenylate kinase signature 166 180 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi18g1890 480 PRINTS Adenylate kinase signature 216 232 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi18g1890 480 PRINTS Adenylate kinase signature 138 151 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi18g1890 480 ProSitePatterns Adenylate kinase signature. 216 227 IPR033690 -
Vvi18g1890 480 PANTHER NUCLEOTIDE KINASE 129 347 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi18g1890 480 Pfam Protein of unknown function (DUF 659) 317 410 IPR007021 -
Vvi18g1890 480 FunFam Adenylate kinase, chloroplastic 131 348 - -
Vvi18g1890 480 NCBIfam adenylate kinase 136 321 IPR006259 GO:0004017|GO:0005524|GO:0016776
Vvi18g1890 480 Pfam Adenylate kinase 139 315 - -
Vvi18g1890 480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 322 IPR027417 -
Vvi18g1890 480 CDD ADK 136 328 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi18g1890 480 SUPERFAMILY Ribonuclease H-like 317 447 IPR012337 -
Vvi18g1890 480 Hamap Adenylate kinase [adk]. 135 344 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1890 Vvi-Chr18 25909353 25934572 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1890 K00939 - vvi:100853175 485.723