Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1888 ATGGCTCGACCCACAAGGACAAGGACAAGGCCAAGGCCACCATCCTCCTCCTCCACCATCACCACGACCCTAACCCTAGAAAACCCATCTCCATCGCAACCTCAACAACCCCAACAGCAGCAGCAGCAAACGACGCTGGTGCTGCGGCTGAATCCCAAGAAGAAGGTGACATGGAAGGAGGGCACTGTCGACAACGAATTCCTCCAGAGGAAGAGCTCCAAGAAGTGCTGCATCTTCCACAAAGAGAAGCCCTTTGACGAGGACGATAGCGATGATGACGACCACCATCATCACCATCATGATCATGGCTGTCGCAAATCCGACGCCGGAAATCAATCTGGTGAGGCTGGCTCCAGTGGGTGCGGTGGTCTTTGA 375 0.5493 MARPTRTRTRPRPPSSSSTITTTLTLENPSPSQPQQPQQQQQQTTLVLRLNPKKKVTWKEGTVDNEFLQRKSSKKCCIFHKEKPFDEDDSDDDDHHHHHHDHGCRKSDAGNQSGEAGSSGCGGL* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1888 124 Pfam Protein phosphatase inhibitor 51 95 IPR011107 GO:0004865|GO:0032515
Vvi18g1888 124 MobiDBLite consensus disorder prediction 9 44 - -
Vvi18g1888 124 MobiDBLite consensus disorder prediction 1 44 - -
Vvi18g1888 124 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PPP1R11-RELATED 14 109 IPR011107 GO:0004865|GO:0032515
Vvi18g1888 124 MobiDBLite consensus disorder prediction 83 108 - -
Vvi18g1888 124 MobiDBLite consensus disorder prediction 83 124 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1888 K17553 - vvi:100248189 166.007