Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1887 ATGCCTCATGCTTTTACCTCTATTGTTGGCTCTGGTATTTTGGCATTGCCATGGACCCTTGCTCAATTGGGTTGGATTGTTGGACCCTTTGTTATTGTCTTCTTTGCGGCAATCACATATTACTTTGCTTCACTTCTCTGTGACTGTTATCGAACTCCTGACCAGATAAAAGGAAAAAGAAACCGCACATACATGGATGCTGTAAGAGTATTTTTAGGTGAAAGAAATGTACTTATCTGTGGCATCTTGCAATATTCAGCACTGTGGGGCACGATGATTGGGTACACGATTACCACCACCATTAGTATTGCGACTGTGAAGAGATCCATTTGTTTCCATCAACATATGTCAAGATGTGATGTACAAGGAAATGTATATATGATGGCGTTTGGAGCAATGGAAATTGTTTTGTCCCAGTTTCCAAACCTAGAAAAAGTTACATTTCTGTCAGTGATTGCAACCGTGACTTCATTTATATATTCACTTATTGCGTTGGGTCTATCTATTGCAAAACTTTCCACAACCCATAAGCTCAAAGGTACTATAATGGTGGCTCATGTGGGAAAGGATATTGCTACATCAACCAAAGTTTGGCATGTTTTTCAAGCTCTTGGAAATGTTGCATTTGCTTACACTTATGCATGGCTGCTGCTAGAAATTCAGGATACCTTAAAGTCACCACCACCAGAGAATAAAGTGATGAAGAAAGTCTCCTTCTATACCATTCTTGGGACAGCAATCTTTTATTGTTCTTTGGGATTCATAGGTTATGCAGCATTTGGAAGTGATGCTCCAGGAAATATTCTTACAGGATTTGATGAACCAGTTTGGCTTGTTGATGTTGGCAACATTGCTGTGATCATTCATTTGATTGGAGGTTATCAGGTGTTTGGTCAAGTAATTTTTGCTACAAATGAGAGGTTGCTCACATCAAGATTGTCAACATCATTCTTTAATAGAACTTACACCATAAGGTTTTCATTCATAAGGAACAGGTCCTTTCACTTTTCATTCAGCAGGCTTCTCATGCGAACGGTCTTTGTCATTTTAACAACTTTGGTTGCCATGATATTTCCATTCTTCAATGCAATCCTGTCAATTCTTGGCTCAATTTCCTTCTGGCCGATAACAGTGTACTTCCCAATGCACATGTATATGATTCAAGCAAAGATCAAGAAGGGAAGTCCTACCTGGATGGTCTTTTATGTTCTAAGCTTTGTGTGTTTGATTGTTTCTCTTGTTTCTGTTATTGGTTCAGTTGCTGATATCTCCCAGAATCTTAGGCATGCAAAGATATTCCATATTGAACTCTAG 1314 0.3881 MPHAFTSIVGSGILALPWTLAQLGWIVGPFVIVFFAAITYYFASLLCDCYRTPDQIKGKRNRTYMDAVRVFLGERNVLICGILQYSALWGTMIGYTITTTISIATVKRSICFHQHMSRCDVQGNVYMMAFGAMEIVLSQFPNLEKVTFLSVIATVTSFIYSLIALGLSIAKLSTTHKLKGTIMVAHVGKDIATSTKVWHVFQALGNVAFAYTYAWLLLEIQDTLKSPPPENKVMKKVSFYTILGTAIFYCSLGFIGYAAFGSDAPGNILTGFDEPVWLVDVGNIAVIIHLIGGYQVFGQVIFATNERLLTSRLSTSFFNRTYTIRFSFIRNRSFHFSFSRLLMRTVFVILTTLVAMIFPFFNAILSILGSISFWPITVYFPMHMYMIQAKIKKGSPTWMVFYVLSFVCLIVSLVSVIGSVADISQNLRHAKIFHIEL* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1887 437 PANTHER OS05G0424000 PROTEIN-RELATED 3 420 - -
Vvi18g1887 437 Pfam Transmembrane amino acid transporter protein 5 422 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1887 Vvi-Chr18 25886258 25888623 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1887 3 434 Organic Solute Cotransporters AT1G58360 46.682 1.87e-144 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1887 K24917 - vvi:100265370 840.491