Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1876 ATGGTCTGGTTAAGCTTGCTACTGATTCACAAGAAGCCTCAAGTCACTATCTCCAGAATTCCAGGCATCCCTGCTAAAATTCCGGTTACTGCTCACCCCTTGGCAGAAGAACCTGTTGAGATTGCATCTAATATCAACTACCATGTGAAATACAGTCTTCATTTTTTTTTTCTCCCTTCAGGTTTTAATTTTGGCACTGTCACTGAAGGAAGGATTCAAGATGCAAAAGATTTTGGAGTTGTCATCAACTTTGAAAAGTATAATGATGTTTTTGGTTTTATCTCATACTATCAATTAAACGGAACTACGACGGAAAGAGGTTCCCCAGTTCAAGCTGTGGTTCTTGATGTTGCCAAGACAGAACACCTTGTGGATTTATCTTTAAAGCCAGAGTTTCTTGATAGACACAGGGAAGACAGTTCTAACAGCCAGGTTGGTAAAAAGAAATGCAGAAGAGAAACACTGTCATTGCTATTGTTATGGCACTTCCAAGCCCTTCAATAG 504 0.3968 MVWLSLLLIHKKPQVTISRIPGIPAKIPVTAHPLAEEPVEIASNINYHVKYSLHFFFLPSGFNFGTVTEGRIQDAKDFGVVINFEKYNDVFGFISYYQLNGTTTERGSPVQAVVLDVAKTEHLVDLSLKPEFLDRHREDSSNSQVGKKKCRRETLSLLLLWHFQALQ* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1876 167 SUPERFAMILY Nucleic acid-binding proteins 61 131 IPR012340 -
Vvi18g1876 167 Gene3D - 66 133 IPR012340 -
Vvi18g1876 167 ProSiteProfiles S1 domain profile. 65 129 IPR003029 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1876 Vvi-Chr18 25750956 25751859 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1876 K14792 - vvi:100262322 150.984