Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1874 ATGGAAAAAGATACAATCTTTGTGTGGAATCCATCGATTAAAGAATCAAAAAGGTTGCCCTCCAAGCCTTTTGAGCAACTTTTTTATTTGGTGTCATATGCATTTGGGTATGATAGCATCACAGACGATTATAAGGTTGTGAGACTTGTGTGCTGCTCTATTAACGATTCATATGAATATCATGTGGAGGTTTTTTCATTGAGGAGCAATGCTTGGAGAAAAATTAGGAGCTTTCCATATTTTCTTTTTACAGATGAGGCAGGGAAACATGTAAATGGTTCAATCAATTGGGCAGTGTCTAGGGACAAAAACAATGATCATTGGTTCATTGCATCACTTGATTTGGCAACAGAATCATATGAAGTTGTGCCACAACCTGATTGTGCAAATGAAACCTTGAAGCCGATAATTAGGGTTTTGGGAGGTCAATTTTGCATTATTTTTGAATATGATGATATTATTGATGTGTGGGTAATGCAGGAATATGGCGTGAAAGAATCTTGGAGTAAATTGGTCACAGTTCCTTTTTTCTCAGATCCGTTGGATGCTAATTATGCAAAACCACTATTTTATTTGAAGGAGGGTGCAATTCTTATAGACTTCTATGGGATGTTAATTTTATATAATTTCAATAGAAATGAATCGACCTCGCCTATGATTTATGGAGTTCATCATTATCATGAAGTTGAAGTCTATTTGGAGAGCATGGTGTCGCCCAATTCTTATAATTAA 732 0.3566 MEKDTIFVWNPSIKESKRLPSKPFEQLFYLVSYAFGYDSITDDYKVVRLVCCSINDSYEYHVEVFSLRSNAWRKIRSFPYFLFTDEAGKHVNGSINWAVSRDKNNDHWFIASLDLATESYEVVPQPDCANETLKPIIRVLGGQFCIIFEYDDIIDVWVMQEYGVKESWSKLVTVPFFSDPLDANYAKPLFYLKEGAILIDFYGMLILYNFNRNESTSPMIYGVHHYHEVEVYLESMVSPNSYN* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1874 243 NCBIfam F-box protein interaction domain 2 202 IPR017451 -
Vvi18g1874 243 Pfam F-box associated 91 179 IPR006527 -
Vvi18g1874 243 PANTHER OS02G0783600 PROTEIN 5 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1874 Vvi-Chr18 25655818 25656549 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1874 - - vvi:104882783 345.51